Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02858 ATGGCTGCAAATTTCAACTGCAACATGACCCAAACCACCATCACAACTCATCCTCATTGGTATTCATCAAAAACTGGAATTTACAGTAGTGTTCATTCTCCTTTGAATCTTCCAACTGACCCTTTTGTTGACattgtttctttcattttttcacATCCTCATGATGGGGTTTTAGCCCTTATTGATTCCTCATCTGGGTTTTCCATTTCTTACTCAAAGTTGTTACCTTTAGTCAAATCTATGGCTTCTGGTTTACATAAAATGGGTGTTTTACAAGGTGATGTTGTTTTGCTTTTACTTCCAAATTCAATTTACTATCCTGTTATACTATTGGCTGTTCTGTATTTAGGTGCTGTTGTTACACCATTGAATCCTCTTAGTAGTGTTGGCGAAATTCGCAAGCAGGTTAATGAATGTGGTGTGAATTTTGCTTTTACTGTGCCTGAAAATGTCAAGAAACTAGAGCTTTTATTAGGAATCAAACCCATTATTTCTGTGCCAGAAAATGACAAGGATTTGAGGAATGAATGTTTCTCATGTTTTTTTAACCTTATTTATGGTAAATTTGATTTGTCTCAAAGGGTGGTTATTAGACAGGAAGATACTGCTGGTATATTGTATTCTTCTGGGACCACAGGTTTGAGCAAAGGAGTTATTTTAACACATAGAAATCTTATTGCTATGGTTGAGCATTTTGTCAGATTTGAAGCTTCTCAATATGAATACTCTTGTACCAAGAATGTGTTTCTAGCTGCTTTGCCAATGTTTCATATATATGGTTTATCGCTTTTTGCTGCTGGATTACTGTCATTGGGTTCTACAGTCGTTGTAATGAGGAAATTTGACATTGATGAGGCTGTTAGGGTGATTGACAAATATAATGTTACACATTTTCCTGTTGTTCCACCGATGGTGTCGGCATTGACAGCGAAGGCAAAGGGTGTTAATGGAAGTAAGTTGAAGAGTTTGAGACAGGTCTCCTGCGGTGCAGCGCCTTTGAGCACAGGAGTTATTAATGGTTTTCTCCATGCTTTCCCTAATGTTGATTTTATACAGGGTTATGGAATGACTGAGTCGACTGCAGTAGGAACACGTGGCTTCAATACTGAAAAGTTTCACAACTATTCTTCAATAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTAGACTGGAATGGTGCTTTTTTGCCCCCAGGTGGCAGCGGCGAGCTTTGGTTGAGAGGGCCTTCAATTATGAAAGGGTACTTGAATAATGAGGAAGCTACAATGTCAACAATTGATAAAGATGGTTGGCTACATACCGGAGATATTGTTCATTTTGATCAGGATGGATATTTACATGTGTCTGACCGATTGAAAGACATTATCAAATACAAGGGCTTTCAGATTGCTCCTGCTGATTTAGAAGCCGTGTTAATTTTGCATCCTGAAATAGTCGATGCTGCTGTTACAGCTGCCAAAGATGAAGAAACTGGGGAGATTCCAGTGGCGTTTGTGGTCAAGAAGGTTGGAAGTATACTTTCTCCGAAGCATGTTATCGATTACGTTGCTGAGCAGGTTGCTCCATACAAGAAAGTTCGGAAAGTGTTCTTCACTGACAAGATACCGAGGTCTCAAACTGGGAAGATCCTCCGAAAGGAACTCAGGCATCGCTTGACTTCTAAACTCTAA 1674 0.3901 MAANFNCNMTQTTITTHPHWYSSKTGIYSSVHSPLNLPTDPFVDIVSFIFSHPHDGVLALIDSSSGFSISYSKLLPLVKSMASGLHKMGVLQGDVVLLLLPNSIYYPVILLAVLYLGAVVTPLNPLSSVGEIRKQVNECGVNFAFTVPENVKKLELLLGIKPIISVPENDKDLRNECFSCFFNLIYGKFDLSQRVVIRQEDTAGILYSSGTTGLSKGVILTHRNLIAMVEHFVRFEASQYEYSCTKNVFLAALPMFHIYGLSLFAAGLLSLGSTVVVMRKFDIDEAVRVIDKYNVTHFPVVPPMVSALTAKAKGVNGSKLKSLRQVSCGAAPLSTGVINGFLHAFPNVDFIQGYGMTESTAVGTRGFNTEKFHNYSSIGLLAPNMEAKVVDWNGAFLPPGGSGELWLRGPSIMKGYLNNEEATMSTIDKDGWLHTGDIVHFDQDGYLHVSDRLKDIIKYKGFQIAPADLEAVLILHPEIVDAAVTAAKDEETGEIPVAFVVKKVGSILSPKHVIDYVAEQVAPYKKVRKVFFTDKIPRSQTGKILRKELRHRLTSKL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02858 557 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 14 556 - -
Tsu02g02858 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 556 - -
Tsu02g02858 557 Pfam AMP-binding enzyme 58 459 IPR000873 -
Tsu02g02858 557 Gene3D - 455 556 IPR045851 -
Tsu02g02858 557 Pfam AMP-binding enzyme C-terminal domain 469 543 IPR025110 -
Tsu02g02858 557 ProSitePatterns Putative AMP-binding domain signature. 205 216 IPR020845 -
Tsu02g02858 557 SUPERFAMILY Acetyl-CoA synthetase-like 50 553 - -
Tsu02g02858 557 CDD 4CL 37 549 - -
Tsu02g02858 557 Gene3D - 30 454 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02858 Tsu-Chr2 31098353 31101506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02858 10 557 Monolignol Biosynthesis Gene Families AT4G19010 62.069 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02858 K01904 - gmx:100804808 866.685