Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02840 ATGGCGTTTAAGACGGCGATTAATTTgttgtcaaacacaattttctcTTTAGATTTGGTTGATTCTGCTGGTTCAGTTGGAGATTTTAAGGAGCTAGTTGAGAATATAATGGAAGAATGTGGAAAACCAAACATTGCTGATCTGTTTCCTGCATTGAAGATGTTTGATCCACAAGGTATTAAAGGTCGTACATCTGTTTATGCTGGTAAGATTATTGATATCTTCCAACGTTTGATTGATCATAGGTTGAAGCTGAGAGAAGTCCAAGATACAGTTTCATCTACACTAGAATGGGCAATGGCAGAATTgctaaaaaaggaaaagattatGTCAAAAGCAAAACATGAGCTAGAACAAATAATTGGCAAAGGAAAACCAGTTGAGGAATCAGATATTACAAAGCTTCCTTATTTACAAGCAATAATAAAAGAGACTCTTCGATTGCATCCTTCAGTTCCATTTTTAATCCCCAGAAAAGCCAATGAAAATGTCGAAATTTGTGGCTACACAATCCCAAAAGATGCACATGTGTTGGTCAATGTGTGGGCTATCGGTAGAAATTCAAGTATTTGGGAAAATGCAAATTTATTTTCACCAGAGAGATTCTTAAAATCAGAAATTGATGTTAAAGGTCATAATTTCGAGCTTATACCATTTGGTGCTGGAAGGAGAATTTGTCCCGGTTTGGCGTTAGCTATGAGGATGTTGTATTTGATGTTGGGTTCATTAATCAATTGTTTTAATTGGAAATTTGAAGATGGAACGAAATTAGATGATATGAACATGGAGGACCACTTTGGGATAACATTAACAAAGGAAGAGCCACTAATAGTCATtccagaaagaaagaaaaatacaattaaCTAG 867 0.331 MAFKTAINLLSNTIFSLDLVDSAGSVGDFKELVENIMEECGKPNIADLFPALKMFDPQGIKGRTSVYAGKIIDIFQRLIDHRLKLREVQDTVSSTLEWAMAELLKKEKIMSKAKHELEQIIGKGKPVEESDITKLPYLQAIIKETLRLHPSVPFLIPRKANENVEICGYTIPKDAHVLVNVWAIGRNSSIWENANLFSPERFLKSEIDVKGHNFELIPFGAGRRICPGLALAMRMLYLMLGSLINCFNWKFEDGTKLDDMNMEDHFGITLTKEEPLIVIPERKKNTIN 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02840 288 Gene3D Cytochrome P450 85 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 PRINTS P450 superfamily signature 140 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 PRINTS P450 superfamily signature 217 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 PRINTS P450 superfamily signature 87 104 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 PRINTS P450 superfamily signature 226 237 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 SUPERFAMILY Cytochrome P450 3 281 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 Pfam Cytochrome P450 89 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 219 228 IPR017972 GO:0005506|GO:0016705
Tsu02g02840 288 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 89 - -
Tsu02g02840 288 PANTHER CYTOCHROME P450 FAMILY PROTEIN 90 282 - -
Tsu02g02840 288 PRINTS E-class P450 group I signature 96 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 PRINTS E-class P450 group I signature 180 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 PRINTS E-class P450 group I signature 216 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 PRINTS E-class P450 group I signature 226 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 PRINTS E-class P450 group I signature 139 157 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02840 288 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 89 - -
Tsu02g02840 288 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 90 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02840 Tsu-Chr2 30798297 30799831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02840 2 278 Cytochrome P450 AT1G33730 43.168 8.82e-94 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02840 - - lja:Lj0g3v0208479.2 382.489