Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02839 atggcTACCCCTGATCCAACATGTACACCACCAATGAAGGCCACTTCCAATGGGGCATTTCAACATGAAAATCCTATGGATTTTGCACTTCCCTTATTAATTGTTCAAATATGTTTGGTTGTTGTTTTTACAAGATTCATTGCATTTCTTTGCAAGCCTCTTAGACAACCTAGAGTTATTGCAGAAGTCATTGGAGGAATATTACTAGGACCATCAGCAATTGGGAGGAACAAGAAATTTCTAGAAATATTTTTCCCTAATAAAAGCTTGACAGTTCTTGAAACACTGGCCAACATTGGCCTTCTATTCTTCTTATTTCTAGTAGGTCTTGAACTCGACATGCGTTCGATACGAAGAACTGGTTCTAAATCCTTATGCATAGCCCTTGCTGGAATCACAGTCCCATTTCTACTTGGCATTGGCACATCACTTGTTCTTCGCGCCACGATATCCAAAGACGCTGATCCAACTCCTTTCCTAGTCTTCATGGGAGTTTCTCTTTCGATTACCGCCTTTCCTGTCCTCGCTCGAATCCTAGCGGAGCTCAAACTCCTCACGACTGATGTCGGTCGTATGGCTATGTCAGCTGCTGCTGTCAATGATGTTGCAGCATGGATACTACTTGCTCTTGCTATAGCTCTTTCAGGATCCAACTCTTCACCTCTTGTTTCTCTATGGGTTCTACTTTGTGGAGTTGGTTTTGTCATCTTTGTCATTGTTGCTATAAAGCCTTTACTTGCATTGATGGCTAAACGTTCCCCTGAGGGTGAACCTGTGAAGGAGATTTACATATGCATCACTTTGACACTTGTTTTGGGTTGTAGTTTTTTAACTGATACTATTGGAATTCATGCACTTTTTGGAGCTTTTGTAGCTGGAATTGTTGTTCCTAAAGATGGTCCTTTTGCTGCTGTTTTAACTGAGAAGATTGAGGATCTTGTTATGAGTCTTTTGTTGCCACTTTATTTTGTGTCTAGTGGTTTGAAGACTAATGTGGCAACTATTAGTGGAGCACTTTCTTGGGGATTACTAATCCTTGTTATATTCACTGCTTGCTTTGGTAAAGTTGTTGGTACTTTTGCTGTGGCATTGATATGTAAGGTTCCTTTTAGAGAAGCAGTGACCCTTGGGTTTCTCATGAACACAAAAGGTTTGGTGGAGCTCATTGTTCTCAACATTGGTAAGGATCGCAAGGTACTGAATGACCAAGCATTTGCAATATGTGTTTTAATGGCATTATTCACCACTTTCATCACCACACCAATCGTAATGGCAGTGTATAAACCAGCTCGTAGAGGATCACCGTACATGCATAAAACAATATTGCGCAAAGATCCAGACACAGAACTTCGAATACTAGCTTGTTTCCACAGCACCTGCAACATTCCTACATTAATCAACCTAATAGAATCATCAAGAGGAACACGAAAGCGAGGAAAGTTATGCATATATGCAATGCATTTGATGGAACTCTCAGAAAGACCTTCAGCCATATCAATGGTTCATAAGGCAAGAAATAATGGTATGCCCTTTTGGAACAAAAAACAACACGACAACAGCGATCAAATGGTAATTGCATTTCAAGCTTATGGACATCTCAGCAGTGTCAATGTTCGTCCAATGACAGCAATTTCATCTCTCAACAACATCCATGAAGACATTTGTTCAAGTGCTCACCAAAAGCGAGTCGCAATGATTCTACTTCCGTTCCACCAACACCAGCGTGTTGATGGAAATATGGAGTCACTAGGTCATTCATTTCGTGTAATGAATGGCCTTGTACTTAGCCATGCTCCTTGCTCGGTTGGAATTTTGGTCGACCGCGGCCTTGGAGGGACTAGTCAAGTCCATGCTAGTGATGTTTCTTACAATGTTGTTGTAGCCTTTTTTGGAGGATGCGATGATCGTGAAGCACTAGCATACGGTATGAGAATGGCAGAACATCCAGGAATTAGACTCActgttataaaatttataactcCGCCGGGGATAACATTAGCATTTGGTGCTAAATTGATTGGTATAACAGCTAACAAAGATaggaaagaaataaaaattgctAGTGGCACCTCACCTGATGAAGATAAACAAGAGGATGACCTATTTTGGTCTGAGTTTTTAGGTGTTTGTTGTAAGAGTGAAGAGTCTATAGTTTATGAGGAAAGGTTGGTAGAAAGTAGAGATGATGTTGTGACAGTATTGAGAGAAAGGAATAAGAGCAATCTGATTTTAGCAGGTAGAATGCCACCAGTGGTACCTTTGCTACATGGAAGTGATTGTGCTGAGCTTGGTCCTGTTGGAAGCTATTTGGCTTCTTCTGAGTTTTCTACATTTGCATCAGTTATAATTTTTCAGCAATATGATCCTAAAACAGATATTCATCCATTGGTAATGGAGGTTTCTGATTACTCTGACATGCCAGACACACCAACACACGGAGTATAG 2445 0.4008 MATPDPTCTPPMKATSNGAFQHENPMDFALPLLIVQICLVVVFTRFIAFLCKPLRQPRVIAEVIGGILLGPSAIGRNKKFLEIFFPNKSLTVLETLANIGLLFFLFLVGLELDMRSIRRTGSKSLCIALAGITVPFLLGIGTSLVLRATISKDADPTPFLVFMGVSLSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSNSSPLVSLWVLLCGVGFVIFVIVAIKPLLALMAKRSPEGEPVKEIYICITLTLVLGCSFLTDTIGIHALFGAFVAGIVVPKDGPFAAVLTEKIEDLVMSLLLPLYFVSSGLKTNVATISGALSWGLLILVIFTACFGKVVGTFAVALICKVPFREAVTLGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGSPYMHKTILRKDPDTELRILACFHSTCNIPTLINLIESSRGTRKRGKLCIYAMHLMELSERPSAISMVHKARNNGMPFWNKKQHDNSDQMVIAFQAYGHLSSVNVRPMTAISSLNNIHEDICSSAHQKRVAMILLPFHQHQRVDGNMESLGHSFRVMNGLVLSHAPCSVGILVDRGLGGTSQVHASDVSYNVVVAFFGGCDDREALAYGMRMAEHPGIRLTVIKFITPPGITLAFGAKLIGITANKDRKEIKIASGTSPDEDKQEDDLFWSEFLGVCCKSEESIVYEERLVESRDDVVTVLRERNKSNLILAGRMPPVVPLLHGSDCAELGPVGSYLASSEFSTFASVIIFQQYDPKTDIHPLVMEVSDYSDMPDTPTHGV 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02839 814 PANTHER CATION/H + ANTIPORTER 1 812 - -
Tsu02g02839 814 Pfam Sodium/hydrogen exchanger family 38 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu02g02839 814 PANTHER CATION/H+ EXCHANGER 3 1 812 - -
Tsu02g02839 814 Gene3D - 32 434 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02839 Tsu-Chr2 30790029 30793442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02839 1 805 Antiporter Super Family AT3G17630 69.517 0.0 1103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02839 - - gmx:100818975 1318.91