Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02803 ATGCAAGGAATGGTTCAGATGAAGTTTCTTAAAGGATTTAGTGCCGACGCCAAGGTGATGTATGAAGAGGCAAGTCAGGTAGCAAATGATGCTGTTAGTAGTATCAGAACTGTTGGATCATTTTGTGCAGAATCAAAAGTTATGGACATGTACaggaaaaaatgtttagggCCAGAGAAACAAGGCACTCGTTTGGGGCTTGTTAGTGGTATAGGCTTACCAAAATGTCTAGTCAAGTTATTGAATTTTTCATCATACTCATTTATGGGTAATCATAAATCATCTCCTATGTCTTAG 297 0.3603 MQGMVQMKFLKGFSADAKVMYEEASQVANDAVSSIRTVGSFCAESKVMDMYRKKCLGPEKQGTRLGLVSGIGLPKCLVKLLNFSSYSFMGNHKSSPMS 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02803 98 Gene3D ABC transporter type 1, transmembrane domain 2 88 IPR036640 GO:0005524|GO:0016021
Tsu02g02803 98 Pfam ABC transporter transmembrane region 5 72 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu02g02803 98 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 88 IPR039421 -
Tsu02g02803 98 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 88 - -
Tsu02g02803 98 SUPERFAMILY ABC transporter transmembrane region 5 72 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02803 Tsu-Chr2 30331071 30331457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02803 5 72 Calmodulin-binding Proteins AT2G36910 30.882 5.64e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02803 K05658 - ccaj:109794544 127.487