Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02789 ATGCCTTCACAAGATAAACCTTCCAAATCTTCATGGAAGCACGAGGACAAAATTTGGAGCAGAATTGAGTCACTTGAAGCATATGCAATTGATGCTTGTATAAATGTGGCTATTAAGAAGCTACTAAATAATCTTGgacaagatgaaaagaaatttAGAGTGGAAATTGAGGCTATTGGTCATGTGAGGCACAAGAACTTCGTTAGACTTTTGGGTTTTTACTTTGAAGGCACTCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGAAATTTATAG 279 0.3405 MPSQDKPSKSSWKHEDKIWSRIESLEAYAIDACINVAIKKLLNNLGQDEKKFRVEIEAIGHVRHKNFVRLLGFYFEGTHRLLVYEYVNNGNL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02789 92 SUPERFAMILY Protein kinase-like (PK-like) 34 92 IPR011009 -
Tsu02g02789 92 Gene3D Phosphorylase Kinase; domain 1 27 88 - -
Tsu02g02789 92 ProSiteProfiles Protein kinase domain profile. 1 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02789 92 PANTHER OS10G0497600 PROTEIN 35 92 - -
Tsu02g02789 92 Pfam Protein tyrosine and serine/threonine kinase 31 92 IPR001245 GO:0004672|GO:0006468
Tsu02g02789 92 PANTHER OS01G0323000 PROTEIN 35 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02789 Tsu-Chr2 30053455 30055231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02789 36 92 Receptor kinase-like Gene Family AT1G55610 50.877 3.08e-13 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tsu02g02789 PK_Tyr_Ser-Thr 3.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02789 - - gmx:732653 104.76