Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02784 ATGGAGATTGAAGCAGCAAGTGGTAGCAACAACAAAAGATGTAACATGGATGAGAGTGAAGATGAAACATATTGTGGTATGGATAGAGGAAGTTTCTTGGCATGGGAAGATCTAAGAGTTATGTTGCCAAATTTTGGAAAAGGGCCAACTAAAAGGTTACTTAATGGGCTTAATGGTTTTGCTGAGCCTGGTAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCTACTTTGCTTGATTCACTTGCAGGTAGACTCTCAAAAAATGTGGTCATGACAGGAAATGTTtttatcaatggaaagaaaaaaaatccaggCTATGGTTTTGTTGCATACGTAACACAAGAAGATGTGTTAATGGGAACACTTACAGTAAGGGAAACCATAACATATTCGGCACACCTACGTCTTCCAACATCGATGCCAAAAGAAGAAGTCAACGACATAATCGAAGGAACAATCACAGAAATGGGTCTTCACGACTGCGCTGATACGTTAATAGGTAACTGGCATTTGAGAGGTATAAGTGGCGGTGAAAGGAAAAGAACTAGCATTGCACTTGAGATTCTCACAAGGCCGCGATTATTGTTTCTCGATGAACCAACCAGTGGTTTAGATAGCGCCTCagcattttttgttgttcaaacTCTTAGAAATGTTGCTCGCGATGGAAGGACTGTTATTTCTTCTATTCATCAACCAAGTAGTGAAGTCTTTGCACTTTTTGATGATCTATTCTTGCTCTCTAGTGGCGAAACTGTTTATTTTGGTGAAGCCAAAAAGGCAATAGAGTTTTTTGCTGAGGCCGGTTTCCCTTGTCCGCGTAAACGAAATCCTTCTGATCACTTCTTAAGATGTATCAATTCTGATTTCGACGTCGTCACAGCTACACTAAAGGGATCTCAAAGGATTCCTGATGTTCCAAATTCAGCAGATCCTTTCGAGAATTTGGCTACAGCACAAATTAAGTCAATGCTAGTTGAGAGATTCAGGCGTTCAGCGTACGCCAAAAGGGTAAAAGACAAGATTCAAGAACTATCAACCAATGAAGGGTTTGAAACTGAGACAAAACTCGGAAGCCAAGCTAGTTGGTGGAAGCAACTCACCACATTGACAAGGAGATCATTTGTGAACATGAGTAGAGATGTTGGTTACTATTGGTTGAGGATTATAATCTACATCATTGTATCTATATGTGTTGGAACAATCTATTTTGATGTTGGCTATAGCTATACTTCCATCTTGGCTCGTGGCGCGTGTGGTGCATTTATATCAGGGTTTATGACTTTCATGTCAATTGGAGGCTTTCCATCTttcattgaagaaatgaagGTTTTTTATCGCGAAAGGATGAATGGATATTACGGAGTAGCAGCATATATTTTAGCAAACTTTCTATCATCATTCCCATTCTTGGTTGCTATTTCTCTTGCTTCTTGCACCATCACATATAACATGGTGAAATTCAGGCCAGGATTCATTCACTATGTGTTTTTCACTCTCAACATCTATGGTTGCATCTCAGTGATTGAGAGTCTCATGATGGTTGTAGCTTCACTTGTTCCAAATTTTCTCATGGGAATCATTACAGGAGCTGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTTAGGTTGCTATCTGATCTTCCAAAACCAGTTTGGCGCTATCCGATTTCATATATCAGTTATGGTGCATGGGCAATACAGGGTTCATACAAGAATGACTTACTTGGACTTGAGTTTGATCCACTAATCCCTGGTGACCCAAAACTAACAGGAGAATATGTGATAACACACATGTTAGGGATTGAATTAAGCCATTCCAAATGGTGGGACTTAACAGCACTTTTAATCATTCTCATATGTTATAGGCTTCTTTTCTTTATCATTCTCAAGTTCAAAGAAAGAGCATCACCATTATTTAAAACACTTTATGCCAAAAGAACCATACAACAGCTTGAAAAAAGACCTTCTTTTAGAAACATGCCAAATTTTCCTTCTCTAAGGCATCAACCACTTCATTCACTATCTTCTCAAGAGGGTCTTAATTCTCCACTCCACAACTAG 2079 0.3824 MEIEAASGSNNKRCNMDESEDETYCGMDRGSFLAWEDLRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVFINGKKKNPGYGFVAYVTQEDVLMGTLTVRETITYSAHLRLPTSMPKEEVNDIIEGTITEMGLHDCADTLIGNWHLRGISGGERKRTSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSSGETVYFGEAKKAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIPDVPNSADPFENLATAQIKSMLVERFRRSAYAKRVKDKIQELSTNEGFETETKLGSQASWWKQLTTLTRRSFVNMSRDVGYYWLRIIIYIIVSICVGTIYFDVGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERMNGYYGVAAYILANFLSSFPFLVAISLASCTITYNMVKFRPGFIHYVFFTLNIYGCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGSYKNDLLGLEFDPLIPGDPKLTGEYVITHMLGIELSHSKWWDLTALLIILICYRLLFFIILKFKERASPLFKTLYAKRTIQQLEKRPSFRNMPNFPSLRHQPLHSLSSQEGLNSPLHN 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02784 692 SMART AAA_5 63 234 IPR003593 -
Tsu02g02784 692 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 29 686 - -
Tsu02g02784 692 MobiDBLite consensus disorder prediction 1 20 - -
Tsu02g02784 692 Pfam ABC transporter 56 205 IPR003439 GO:0005524
Tsu02g02784 692 Pfam ABC-2 type transporter 369 578 IPR013525 GO:0016020|GO:0140359
Tsu02g02784 692 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 269 IPR027417 -
Tsu02g02784 692 Pfam ABC-2 type transporter 234 290 IPR043926 GO:0140359
Tsu02g02784 692 Gene3D - 33 271 IPR027417 -
Tsu02g02784 692 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 277 IPR003439 GO:0005524
Tsu02g02784 692 CDD ABCG_EPDR 30 259 - -
Tsu02g02784 692 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 29 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02784 Tsu-Chr2 29966496 29974370 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02784 20 278 Calmodulin-binding Proteins AT2G36910 26.690 2.56e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02784 K05681 - gmx:100777598 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02784 02 29966496 29974370 Tsu02g02784 02 29966496 29974370 ECH
Tsu02g05043 02 59520942 59523380 Tsu02g02784 02 29966496 29974370 PCT