Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02766 ATGTTGCAAGAAGGGTCATCTTCTGCTACTTGTTTACCCTTAAAGTTCTTCTCCATGATGTCAGCTTCACCTAGTTTAGGATCCCCACATCCTTGGCTTAAAGAACTGAAATCTGAAGAAAGGGGTTTGTATTTGATCCATTTGTTGCTCACTTGTGCAAATCATGTAGCTGATTGTAATCTTGAGAATGCAAATGTAACACTTGAGCAAATTTCCATGCTTGCTTCTCCTGACGGCGACACCATGCAGCGAATCGCAGCCTATTTTACTGAAGCACTTGCTGATAGGATACTCAAAGCATGGCCTGGTCTCCACAAAGCACTTAACTCTACTAGAATGGTTATGGTTTCAGAAGAGATTCTTGTGCAGAAGCTCTTTTTTGAGCTTTTCCCTTTCTTGAAGGTAGCTTATATTCTTACAAATCAAGCTATCATCGAAGCGATGGAAAGGGAGAAAATGATTCACATAATTGATCTCAATGCTGCTGAACCTGCCCAATGGATTGCACTCTTACAAGTTTTGAGCACACGTCCCGAAGGCCCTCCGCATTTGAGAATAACCAGCGTCCATCAGAAGAAAGAAGTTCTTGACCAGATTGCTCATAGACTGATTGAAGAAGCTGAAAGGTTGGATATACCATTCCAATTCAATCCTGTCGTCAGCAAATTAGAAAACCTCGAGTTTGAGAAACTTCGTGTTAAAACTGGCGAGGCATTAGCAATTAGTTCTATCCTCCAATTACATACCCTTTTAGCCTTGGATGATGAAACCATGAAGAGAAAATCTCCTCTTTTGTTAAAACCCTCAAATGGAATTCACTTGCAAAGATTCCATCCAATGGACCAAACTACATTAGGTGATTTGCTCGAGAAAGATATGGTTAACGGATATACCAGAAGTCTTGAGTCAACCTCATCATCACCGGCTTCAATTAACATGGAGAGTTTTCTCAAGGCCTTGTGGAATTTATCACCAAAGGTAATGGTTGTAACAGAACAAGACTCCAATCATAATGGTTCAACTCTTATGGACAGGCTACTAGAAGCTTTATACTCTTATGCAGCATTATTTGATTGTTTGGAATCAACAGTCCCAAGAACCTCATTGGAGAGATTAAGGGTGGAGAAGATGCTTTTCGGCGATGAAATAAAGAACATTATTGCATGTGAGGgattagaaagaaaagaaaggcaTGAAAAGCTTGATAAGTGGTTTATGAGATTTGATTTTACTGGATTTGGTCATGTGCCTTTAAGTTATTTTGGTAGGTTGCAAGCAAGGAGGTTTCTGCAGAGTTGTGGTTGTGCAGGATATAAAATGAAGGAGGAAAATGGTTGTGTTGTAATATATTGGCAAGATAGGTCCTTGTTTTCGATATCAGCTTGGAGACCTATGAAGTAA 1401 0.3926 MLQEGSSSATCLPLKFFSMMSASPSLGSPHPWLKELKSEERGLYLIHLLLTCANHVADCNLENANVTLEQISMLASPDGDTMQRIAAYFTEALADRILKAWPGLHKALNSTRMVMVSEEILVQKLFFELFPFLKVAYILTNQAIIEAMEREKMIHIIDLNAAEPAQWIALLQVLSTRPEGPPHLRITSVHQKKEVLDQIAHRLIEEAERLDIPFQFNPVVSKLENLEFEKLRVKTGEALAISSILQLHTLLALDDETMKRKSPLLLKPSNGIHLQRFHPMDQTTLGDLLEKDMVNGYTRSLESTSSSPASINMESFLKALWNLSPKVMVVTEQDSNHNGSTLMDRLLEALYSYAALFDCLESTVPRTSLERLRVEKMLFGDEIKNIIACEGLERKERHEKLDKWFMRFDFTGFGHVPLSYFGRLQARRFLQSCGCAGYKMKEENGCVVIYWQDRSLFSISAWRPMK 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02766 466 PANTHER SCARECROW-LIKE PROTEIN 3 4 465 IPR030008 GO:0003700|GO:0005634|GO:0009739
Tsu02g02766 466 ProSiteProfiles GRAS family profile. 36 463 IPR005202 -
Tsu02g02766 466 Pfam GRAS domain family 45 463 IPR005202 -
Tsu02g02766 466 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 465 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02766 Tsu-Chr2 29656401 29658887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02766 1 466 GRAS Transcription Factor Family AT1G50420 65.971 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu02g02766 GRAS 3.1e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02766 - - gmx:100814131 765.763