Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02758 ATGCTTCAAAGCTTGGTCCCTCGTCCACCTCTCACTTCCaaacctaataataataatatgaatgcCAAACGCGCCGAACGCGAACACGACGACGATGATTCCAACCTTCAGGAACAACCATCGTTCAAAAGACCTAACTACTCCGGCGACAAAACGGTGGCGGAACCCGAAGAACACGACCAAGAACAAGCCTTCGAACCTGAAAACGAAGGCGAATCAACAGGTTTGAAACTCCTAGGGCTTTTGCTTCAATGCGCTGAGTGCGTTGCCATGGATAACCTCGATTTCGCCAACGACCTGTTACCAGAGATTACCGAACTTTCCTCACCGTTCGGAACTTCGCCGGAGCGCGTTGGAGCTTATTTCGCACAGGCGCTACAAGCGCGTGTGGTGAGTTCTTGTCTTGGTAGTTACTCACCGTTAACCGCTAAATCGGTAACCCTAACTCAGTCGCAAAGAATCTTCAACGCGTTTCAATCCTACAACTCAGTTTCACCGTTGGTGAAATTCTCACACTTCACCGCTAATCAAGCAATCTTCCAAGCCGTGGACGGTGAGGATCGTATCCACATCATCGACCTCGATATCATGCAAGGACTTCAATGGCCAGGGTTGTTCCACATCCTCGCTTCACGATCCAAGAAAATCCGCTCCGTTAGAATCACCGGTTTTGGGTCTTCGTCAGAGCTTCTAGAATCAACGGGAAGAAGACTCGCCGATTTCGCGAGTTCACTCGGTCTTCCATTCGAGTTTCATCCAATTGAAGGCAAAATCGGAAGCGTAACGGAACCGAGTCAACTCGGTGTTAGACCAAACGAAGCAATCGTTGTTCACTGGATGCATCATTGCTTATACGATATAACCGGAAGCGATTTAGGAACGTTGAGATTGCTGAGTCAGCTTCGTCCAAAACTAATCACCACCGTTGAACAGGATCTTAGCCACGCTGGTAGTTTCCTCGCGAGGTTTGTGGAAGCTTTGCATTATTACAGCGCGTTGTTCGACGCGCTTGGGGATGGATTGGGTATGGACAGTGTCGAGAGGCATATGGTGGAGCAGCAACTGTTGGGGTGTGAGATAAGGAACATTATTGCCGTTGGTGGGCCCAAGAGGACTGGTGAGGTTAAAGTTGAGAGATGGGGGGATGAATTGAAACGGGTAGGATTTCGACCCGTTTCGCTACGGGGTAACCCGGCTGCACAAGCCAGTTTGTTGTTGGGGATGTTTCCTTGGAGAGGGTATACTTTGGTGGAAGAGAATGGTTCTCTGAAACTTGGTTGGAAGGATCTTTCACTGTTGATTGCTTCTGCTTGGCAGCCGTTGGATTTGATGACTTATACTGATTGA 1347 0.4833 MLQSLVPRPPLTSKPNNNNMNAKRAEREHDDDDSNLQEQPSFKRPNYSGDKTVAEPEEHDQEQAFEPENEGESTGLKLLGLLLQCAECVAMDNLDFANDLLPEITELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQAVDGEDRIHIIDLDIMQGLQWPGLFHILASRSKKIRSVRITGFGSSSELLESTGRRLADFASSLGLPFEFHPIEGKIGSVTEPSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLSQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGMDSVERHMVEQQLLGCEIRNIIAVGGPKRTGEVKVERWGDELKRVGFRPVSLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQPLDLMTYTD 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02758 448 ProSiteProfiles GRAS family profile. 69 439 IPR005202 -
Tsu02g02758 448 PANTHER SCARECROW-LIKE PROTEIN 23 43 440 - -
Tsu02g02758 448 Pfam GRAS domain family 80 439 IPR005202 -
Tsu02g02758 448 MobiDBLite consensus disorder prediction 1 20 - -
Tsu02g02758 448 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 440 IPR005202 -
Tsu02g02758 448 MobiDBLite consensus disorder prediction 1 71 - -
Tsu02g02758 448 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02758 Tsu-Chr2 29365771 29367627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02758 20 442 GRAS Transcription Factor Family AT5G41920 65.654 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu02g02758 GRAS 4.2e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02758 - - gmx:100816249 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02758 02 29365771 29367627 Tsu02g02758 02 29365771 29367627 ECH