Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02756 ATGGCATCAATGGAAGACATCAACATGAGTACTGAGGAAATTACACTTCCAGGATTCCGATTTCACCCCACAGAAGAAGAACTTCTTGATTTCTATCTTAAAAATATGGTTGTTGGCAAAAAACTTCGTTTTGATGTCATTGGTTTTCTCAACATCTATCACCATGATCCTTGGGATTTGCCTGGTTTGTCAAAGGTTGGGGAAAGAGAATGGTATTTCTTTGTGCCAAGGGACAAAAAACATGGTAGTGGAGGAAGGCCTAACCGCACAACTGAAAAAGGATTCTGGAAAGCAACTGGTTCGGATCGAAAAATTGTGACCTTATCTGATCCGAAGAGGATCATCGGGTTGAGGAAGACACTAGTTTTCTACGAGGGAAGAGCACCTCGTGGAACCAAGACCGATTGGGTCATGAACGAGTATCGTTTACCTGACAACAGCCCCTTGCCTAAGGACATAGTGTTATGCAAGATATATAGAAAGGCAACTTCCTTGAAAGTGTTGGAACAAAGAGCAGCAGAAGAGGAAGAAATGAAACAAATGTTGGGTTCCCCAGCATCCCCACTTTCCTCTACGGACACAATCTCTTTTAGCTACACACAACAAGACCAACACGTGTCCCTACCTATGTTGTTCCAACAAGTCATTCCTAAGAAAGAATCTGAACCTGaaattgttgaaattgaaactgATGACAAGGTTTCTTTGTCCGTGTCAGCACCAATTAGTcatgaaaaaattgtgaaagaTAACAAAAAGACTTGTGGAACATCTTTGCAATTGCCCTTAGGGAAGGACAATGTGCCTGAGTTACAGTTACCTATAGCTGCGGATTGGACCCAAGATACGTTTTGGGCTCAGCTTAATAGTCCTTGGCTACAAAATTGGACTGCTTACTCCAACATCCTTAATTTCTAA 918 0.4052 MASMEDINMSTEEITLPGFRFHPTEEELLDFYLKNMVVGKKLRFDVIGFLNIYHHDPWDLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGTKTDWVMNEYRLPDNSPLPKDIVLCKIYRKATSLKVLEQRAAEEEEMKQMLGSPASPLSSTDTISFSYTQQDQHVSLPMLFQQVIPKKESEPEIVEIETDDKVSLSVSAPISHEKIVKDNKKTCGTSLQLPLGKDNVPELQLPIAADWTQDTFWAQLNSPWLQNWTAYSNILNF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02756 305 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
Tsu02g02756 305 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Tsu02g02756 305 SUPERFAMILY NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Tsu02g02756 305 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Tsu02g02756 305 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 8 305 - -
Tsu02g02756 305 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02756 Tsu-Chr2 29309797 29311975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02756 12 302 NAC Transcription Factor Family AT2G17040 59.386 5.61e-120 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu02g02756 NAM 3.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02756 - - gmx:732555 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02756 02 29309797 29311975 Tsu02g02756 02 29309797 29311975 ECH