Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02755 ATGAGCAATTTGATGCAGGTAAGATGCAAGAACCAAGGACTATGCACAAAAGAAGGAACAAGAGTGGTATTAACTGATCTTAATCACAATAATCAAACTGATTTTGTTCTAAGCAGTAGAGCCTTCTCTGCCATGGCTCAAAAAAATATGAGCCAAAAAATTTTGAAGCTTGGCATTGTTGACATTGAATACAAAAGAGTACCATGTGAGTACAAAAAACAGAATTTGGCTGTTCGTGTTGAAGAATCAAGCaaaaaatcagattatttagcaattaaatttttgtatcaagGTGGTCAAACAGAAATTGTGGGTGTTGATGTAGCTCAGGTTGGATCATCACGGTGGACATACATGAGCCGAAATCATGGGGCCGTGTGGGACACAAGTAGGGTTCCACAAGGGGCATTACAACTTAGGTTAGTGGTTACAGCAGGATATGATGGAAAATGGATTTGGGCAAAAAAAGTGCTTCCAGCTGATTGGAAAAATGGGGTGATATATGATTCTGATGTTCAGATTACAGATATTGCACAAGAGGGTTGTTCACCATGTGATGATGATACTTGGTCATGA 576 0.3733 MSNLMQVRCKNQGLCTKEGTRVVLTDLNHNNQTDFVLSSRAFSAMAQKNMSQKILKLGIVDIEYKRVPCEYKKQNLAVRVEESSKKSDYLAIKFLYQGGQTEIVGVDVAQVGSSRWTYMSRNHGAVWDTSRVPQGALQLRLVVTAGYDGKWIWAKKVLPADWKNGVIYDSDVQITDIAQEGCSPCDDDTWS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02755 191 Pfam Expansin C-terminal domain 77 159 IPR007117 -
Tsu02g02755 191 PANTHER EXPANSIN-LIKE A1-RELATED 5 187 - -
Tsu02g02755 191 PANTHER EXPANSIN-B3 5 187 - -
Tsu02g02755 191 Gene3D - 3 70 IPR036908 -
Tsu02g02755 191 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 74 IPR007112 -
Tsu02g02755 191 Gene3D - 71 175 IPR036749 -
Tsu02g02755 191 PRINTS Expansin/Lol pI family signature 57 73 IPR007118 GO:0005576
Tsu02g02755 191 PRINTS Expansin/Lol pI family signature 116 130 IPR007118 GO:0005576
Tsu02g02755 191 PRINTS Expansin/Lol pI family signature 156 170 IPR007118 GO:0005576
Tsu02g02755 191 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 88 170 IPR007117 -
Tsu02g02755 191 SUPERFAMILY PHL pollen allergen 75 170 IPR036749 -
Tsu02g02755 191 SUPERFAMILY Barwin-like endoglucanases 5 72 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02755 Tsu-Chr2 29296263 29298297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02755 5 191 Expansin Gene Family AT4G38400 64.550 2.46e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02755 - - gmx:100819849 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02755 02 29296263 29298297 Tsu02g02755 02 29296263 29298297 ECH