Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02741 ATGGACATGAACAATAAGAGAACTGTCGCTGCTGCCGTCGTAACGAGCCATCCCAACGTTTCTACTACTATTAATGTTCAAGAAAACATGAATTCTGTCGATAAATGGGTGAACAATATCCATGAACAAAATGTGCAACAAAGTATTTCCAATAGTGAACCTCACTTGGAAATGAAGTTTGAATCTGAGGCATCGGCTTatgatttttataattcatataGTAAAAGAATTGGATTTGGTATTCGTCAAGAATATACAAATAAAAGCAGAGTAGATGGAGTTTTGACTTCAAGAAGATTCACATGTTTCAAAGAGGGCACACAAAGTGTTGACAAAAGATATGACTCGATAGCGGAGCCAAGAGCAGAAACTAGAACGGGGTGTCAAGCGTGTATGGCTATTTCACTTGATCGAAAGATAGGGAAATATAAGGTTGTTGACTTTATAGCTCAACATAACCACCCTCTTCAACCGCCAGAGCATGTTCATATGATTCGCTCTCATCGGCGCATATCTGAGGCACAAGCATCACAAATTGTGTTGGGAGATGAATCAGGATTAAGACCAAAAGATTTGCACGAATATATATATCCAAACAAGCTGGTGGTATAG 612 0.3824 MDMNNKRTVAAAVVTSHPNVSTTINVQENMNSVDKWVNNIHEQNVQQSISNSEPHLEMKFESEASAYDFYNSYSKRIGFGIRQEYTNKSRVDGVLTSRRFTCFKEGTQSVDKRYDSIAEPRAETRTGCQACMAISLDRKIGKYKVVDFIAQHNHPLQPPEHVHMIRSHRRISEAQASQIVLGDESGLRPKDLHEYIYPNKLVV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02741 203 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 26 175 - -
Tsu02g02741 203 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 175 - -
Tsu02g02741 203 Pfam FAR1 DNA-binding domain 68 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02741 Tsu-Chr2 29109044 29110000 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g02741 FAR1 9.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02741 - - cam:101500125 270.396