Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02734 ATGGTGACCTTGTCTACTTCCATTATTGCATGCTTGGACTCACATGAAGTTGATCCTAAGCTTATTATTCCCTTTGCAGTTTTCATCAATGCTTTCTTGTTCTTAATGGCCACAGTTCCTCTATCTGGTGGCCACATGAGCCCTGTTTTCACATGTATAGCTGCACTAAAAGGTGTTGTAACAATTTATCGTGCCCTACTTTATGTGATAGCACAATGCATTGGTTCAATAATTGGTTTCTATATACTAAAGTGTGTGATGGAACCAAGATTAGTAAATACATATTCCTTAGGAGGTTGTGCTATTGGTGGCAAAGGACTTACTTCTAGTATTAATCAGTATGAAGCTTTGTTATTGGAATTCTCTTGCACATTTTTGGTACTTTTTTTGGGTGTCACATTGgcttttgacaaaaaaaggtCAAAGAATATGGGCTTACCAATGGTATGTTTGGTCATAGCTGGTGCCATGGCATTGGCAGTATTTGTGTCGATAACAGTAACGGGCCGGGCAGGTTATGCTGGTGTTGGGCTTAACCCGGCGAGATGCTTAGGTGCGGCGTTGCTTCATGAGGGTTCGTTATGGAATGGACATTGGGTTTTTTGGGTTGGGTCTATCATAGCTTGTTTAACCTATTATAGTGTCTCTATCAACCTACCAAAGCAGGGTTCAACTTCCGATGATGACGAGGAATATGTTATCTTAAAGTTGGCTCGTGGTTCTCTTGATACTATTCGTAAGGGTGGTATTTCAAATGATTTTGCAATAGAACGAAGTGGCTTTCAAGAATATTTATCGTGCACTACACAAATATGA 816 0.3922 MVTLSTSIIACLDSHEVDPKLIIPFAVFINAFLFLMATVPLSGGHMSPVFTCIAALKGVVTIYRALLYVIAQCIGSIIGFYILKCVMEPRLVNTYSLGGCAIGGKGLTSSINQYEALLLEFSCTFLVLFLGVTLAFDKKRSKNMGLPMVCLVIAGAMALAVFVSITVTGRAGYAGVGLNPARCLGAALLHEGSLWNGHWVFWVGSIIACLTYYSVSINLPKQGSTSDDDEEYVILKLARGSLDTIRKGGISNDFAIERSGFQEYLSCTTQI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02734 271 SUPERFAMILY Aquaporin-like 21 211 IPR023271 -
Tsu02g02734 271 PANTHER AQUAPORIN-LIKE 1 247 - -
Tsu02g02734 271 Gene3D Glycerol uptake facilitator protein. 1 231 IPR023271 -
Tsu02g02734 271 PRINTS Major intrinsic protein family signature 27 51 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g02734 271 PRINTS Major intrinsic protein family signature 64 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g02734 271 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g02734 271 PRINTS Major intrinsic protein family signature 199 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g02734 271 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 247 - -
Tsu02g02734 271 Pfam Major intrinsic protein 23 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02734 Tsu-Chr2 28956007 28956822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02734 32 209 Major Intrinsic Protein MIP AT2G37180 31.111 9.13e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02734 K09866 - gmx:100804160 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02734 02 28956007 28956822 Tsu02g02734 02 28956007 28956822 ECH