Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02709 ATGAATGATTttcttgttgatgatgttttggCTTTAGGAAATGGTGGAATTAGAATAGGATATGATATTGGAATTGGTTCTGGATCTTTTGCTGAAATGGCTCAGAAGATGGTCAAATCACAAAACGATGACAATTTGGCTCTCAAAGTGTTCTCAATATCTTGTGTATATTTTCCATCTAGATTTTCGGATGCCGATGTTACCACAAGTTATGAAAAATGGGGGAAGAGAAGAGCAAGTTCATCAAAATGTAGAGATCCTAAAATTGTTGGCACTGTTACTTTAGGTAAGCCTTGTGATTATGGTTCAAAAACTTTGAAGGCTGATAatattgttgatgatgaagTTCCTTCTGGTTTTATTCCTACACGTTTGATTACTGTGTCCTCTGTAAATTCTAGTTCTATTCCTTCTGTTGAAACTTCAAATGTTCCTTCTGGTTTTATGCTTTGGGATCAAGATGTGAGACCCTTCATAGTTCCTTTTGCATTGCAGGTTGCAGATTTTGGATTATCAAAGCTTGCTGATGTTGAAAATTCAACTTCATCTGCTATAGTTGCGGAGGGTACATTCGGTTACATGCCACCTGAATATGCGCATGGTGTTATCGCTCTTTCTCCGAAAATAGATGTCTATGCATTTGGAGTTGTTCTATATGAACTAATTTCTGCTAATCAAGTTGTAATCAATGATGGTCCTGAAGTAAAAGGTCTTGTAGCTTTGGTAATTCTCATGTATTATTTTCAAGTAGTATcctaa 759 0.3412 MNDFLVDDVLALGNGGIRIGYDIGIGSGSFAEMAQKMVKSQNDDNLALKVFSISCVYFPSRFSDADVTTSYEKWGKRRASSSKCRDPKIVGTVTLGKPCDYGSKTLKADNIVDDEVPSGFIPTRLITVSSVNSSSIPSVETSNVPSGFMLWDQDVRPFIVPFALQVADFGLSKLADVENSTSSAIVAEGTFGYMPPEYAHGVIALSPKIDVYAFGVVLYELISANQVVINDGPEVKGLVALVILMYYFQVVS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02709 252 SUPERFAMILY Protein kinase-like (PK-like) 164 230 IPR011009 -
Tsu02g02709 252 PANTHER LYSM RECEPTOR KINASE 1B 162 242 - -
Tsu02g02709 252 ProSiteProfiles Protein kinase domain profile. 19 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02709 252 ProSitePatterns Protein kinases ATP-binding region signature. 23 49 IPR017441 GO:0005524
Tsu02g02709 252 Gene3D Transferase(Phosphotransferase) domain 1 150 245 - -
Tsu02g02709 252 Pfam Protein kinase domain 164 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02709 252 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 162 242 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02709 Tsu-Chr2 28700589 28702735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02709 131 241 Receptor kinase-like Gene Family AT3G21630 42.105 7.53e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tsu02g02709 Pkinase 1.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02709 - K13429 mtr:MTR_5g086040 130.568