Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02688 ATGGCTAATAGAATTATCACTAGTTTTGTTGTCACATTGGTGGTGCTAGCCACAATATGTGATGCACAATTGTCATCTACCTTTTACGATGGTACATGCCCAAATGCACTTAGTACTATTAGAACTGCGATTCGTACTGCAGTTTCTAAAGAGCGTCGTATGGCTGCATCTCTTATTCGCCTTCATTTTCATGATTGTTTTGTTCAGGGATGTGATGCATCAATTTTGTTGGATGATAGTTCCACGATCGAGAGCGAAAAGAGTGCACTTCCAAATGTTAACTCAGTAAGGGGATTTGAAATCATTGATAAAGCAAAATCTGAAGTGGAAAAAGTATGCCCAGAAGTTGTGTCTTGTGCAGACATAGTAGCTATAGCAGCACGTGATGCATCATTTGCTGTAAGTTTAAGTTGTGCGCACACAATCGGACAAGCTCAATGTTTCACATTTCGTGATAGGATATACAACAATGCAAGTGACATAGATGCTGGATTTTCTCGTACTCGCCAACGTGGTTGTCCATCTTTGAGTACCACCACAAACAATCAAAAGTTGGCAGCATTGGACTTGGTCACACCCAATTCTTTTGATAACAATTATTTCAAGAATTTAATTCAGAAGAAAGGACTTTTACAATCAGATCAAGTTTTATTCAGTGGAGGATCTACAAATTCTATTGTTTTAGAATACAGCAAAAATCCTACAACTTTTAAGTCTGACTTTGCCACAGCTATGATAAAGATGGGAGATATTGAACCCTTAACTGGATCTGCCGGAATCATAAGAAGCATTTGCAGTGCTGCCAACTAA 810 0.3852 MANRIITSFVVTLVVLATICDAQLSSTFYDGTCPNALSTIRTAIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLDDSSTIESEKSALPNVNSVRGFEIIDKAKSEVEKVCPEVVSCADIVAIAARDASFAVSLSCAHTIGQAQCFTFRDRIYNNASDIDAGFSRTRQRGCPSLSTTTNNQKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTNSIVLEYSKNPTTFKSDFATAMIKMGDIEPLTGSAGIIRSICSAAN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02688 269 CDD secretory_peroxidase 23 267 IPR033905 GO:0004601|GO:0042744
Tsu02g02688 269 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 PANTHER PEROXIDASE 72-RELATED 5 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 PANTHER PEROXIDASE 72-RELATED 134 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 Gene3D - 27 133 - -
Tsu02g02688 269 ProSiteProfiles Plant heme peroxidase family profile. 23 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 Gene3D Peroxidase, domain 2 134 248 - -
Tsu02g02688 269 SUPERFAMILY Heme-dependent peroxidases 23 269 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 PANTHER PEROXIDASE 5 131 - -
Tsu02g02688 269 PANTHER PEROXIDASE 134 268 - -
Tsu02g02688 269 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Tsu02g02688 269 Gene3D - 249 269 - -
Tsu02g02688 269 Pfam Peroxidase 41 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02688 269 Pfam Peroxidase 134 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02688 Tsu-Chr2 28395703 28397240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02688 9 269 Peroxidase AT1G14550 59.236 3.73e-127 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02688 K00430 - gmx:100786161 423.705