Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02686 atgatCGCTTTTTCTTACGGCAGCATATGTCACGCATGCCATAGTTGCAACATCCATAACCGATGCCATGCCGATCAGATAAGGCATTTTAGAATGACTTGGATTTTGAACATAGAAGAGCAGAGGCTCAAGAAGAAAGATAAAGTTTTAGCAGacatgataaaagaaaatgagcAGATGTTGGAGATAGAAGAGCAGAGGCTCAAGAAGAAAGATAAATTTTTAGCAGacatgataaaagaaaatgagcAGATGTTGGAGATAGAAGAGCAGAGGCtcaaaaagaaagagaaatttATAGCAGACATAGAATCAACGCTTGAGAAGAAAGCCAAGTTGATAGAAGAAAATGAGAAGCTTAGAGAGCAAAGGGACACACTTAAAGAAAAAGATTTGGAAACTGCTGCTACCTCTCCTAAGCCGGTGTCTTCCGGTGACCACATGAAGATTATGCTAACCATATCATTTTTTATATGGTATATGCAAGGACAATTCTTTAATGTCCATGTTCAAAATCCAAGTCATTCTAAAATGCCTTATCTGATCGGCATGGCATCGGTTATGGATGTTGCAACTATGGCATGCGTGACATATGCTGCCGGAAAAAGGAATGCAAAAAGGGTTTCAGCAAAAAGGAATACAAAAAGGTTAGGAAACTCTGTTCAAATGGTGCTGGTTGATGCCAAGggtttgattttgattctttgTTTCATTTCAAGGAGGGATAGTTTTATCACAGAGCTTTTTGTGATGCTTTGGCTGAGGAGAATGCAAAATCTCAGAATCAAGTTGTTGGGAAAGCTAATTCAGAATCTGATTCAAAGTTCTAAGTTGCCTTCCAAACCACTTCCTCCTTATCAGGCTGGGGCATATGATGATGAGGAAGCAGCTGCCAGAGCGTATGATCTTGCTGCTCTCAAATATTGGGGTCCTGGGACTCTCATTAATTTCCCAGTTAAAGTTGATGTTACAGAGGGTTCTGATAAGCTAGCTGAAGCTCCGTGGAAGGTTCTAGATAGCTACAGATCTCAGATGGCTTGCAGGGGTGTGTTTGTCCAGGAAATTAATTTCACTACTTTGTGTTTTGTTGCTTTTAGTGTCATAGTTTGTATCATAGAGGCTATTGGTTCTAAGATTGGACACCAAATTTTAAGCTTCTTTCTGAATGGAAGAGAAGGAAAGGTGGATTTAGAGCTTCCATGTTTATTTTTGTTATTAGCATTGGACAATATGGGTTTTGTGGCACACATAGTCAGCTTATGGGTTCAACTTTGCTATAAGTATCAGCTTCTGGTTTTCTTGCCAGATTTGATTCCTTGGGGAGTTTCATATCCGACCTATTTGTGCATACAAGGGGATGTATTTAACTATTGA 1374 0.3755 MIAFSYGSICHACHSCNIHNRCHADQIRHFRMTWILNIEEQRLKKKDKVLADMIKENEQMLEIEEQRLKKKDKFLADMIKENEQMLEIEEQRLKKKEKFIADIESTLEKKAKLIEENEKLREQRDTLKEKDLETAATSPKPVSSGDHMKIMLTISFFIWYMQGQFFNVHVQNPSHSKMPYLIGMASVMDVATMACVTYAAGKRNAKRVSAKRNTKRLGNSVQMVLVDAKGLILILCFISRRDSFITELFVMLWLRRMQNLRIKLLGKLIQNLIQSSKLPSKPLPPYQAGAYDDEEAAARAYDLAALKYWGPGTLINFPVKVDVTEGSDKLAEAPWKVLDSYRSQMACRGVFVQEINFTTLCFVAFSVIVCIIEAIGSKIGHQILSFFLNGREGKVDLELPCLFLLLALDNMGFVAHIVSLWVQLCYKYQLLVFLPDLIPWGVSYPTYLCIQGDVFNY 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02686 457 Coils Coil 51 71 - -
Tsu02g02686 457 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 287 319 - -
Tsu02g02686 457 PANTHER OS03G0770700 PROTEIN 287 319 - -
Tsu02g02686 457 SUPERFAMILY DNA-binding domain 288 320 IPR016177 GO:0003677
Tsu02g02686 457 Coils Coil 76 96 - -
Tsu02g02686 457 Coils Coil 103 133 - -
Tsu02g02686 457 ProSiteProfiles AP2/ERF domain profile. 227 318 IPR001471 GO:0003700|GO:0006355
Tsu02g02686 457 Gene3D AP2/ERF domain 279 321 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02686 Tsu-Chr2 28384612 28391142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02686 285 350 AP2-EREBP Transcription Factor Family AT3G54320 48.529 9.89e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02686 K09285 - ssl:SS1G_08041 64.3142