Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02666 ATGGTTGGCATCTCCCCTGACAGGGATGGGAACAGCTTTCGGGCTTTCCTGTTACACACCTCGGTTAAGGCTATCCACCTCTATGAGGTTGGATCTataacccaattttttttctctttttttttttctttctttctctctcgtGTTTCTTTGTGTCCGTGTGTTCTTCAAATCAACCCCAACCATCCAGACAATCTTGCACCATTGGAGGATGCAAATTATGAAGAAATCCGTGCTAGTTACCGAAGTGCTGCACTCAGTTTACATCCTGATAAACTATTGAAGACGTCTGATACATCCAGCAGTGACATAACAACTTCAGAGAGATTTCTCAAAGTACACAAAGCATGGGAAGTTCTAAGCGATTCAACCACTCGTTTGTTTTATGACAAAGAGCTCAAAAGTTCAAGGCGGGAGGATTTCTTGGCTTCTGAAGTTGCAGAAGATTTAAGCTTACAGGATATGACAGCTGAAGATGTTGGTGAAACATTGGAACTGTTTTATCAATGTCGGTGTGGTGATTACTATGCTGTGGACTCATTGGAATTGCAGAAAATAGGGTATTCCTTGTCAAGAGATGGAAACAGCATCAACATTTCTATACTCAATGTTGATACTCGACCAGGATCAGTGATTCTTCCTTGTGGATCGTGTTCGTTGAAAGCTCGTCTTGTACTCAGTATGGATAACAGTTGA 696 0.3951 MVGISPDRDGNSFRAFLLHTSVKAIHLYEVGSITQFFFSFFFSFFLSRVSLCPCVLQINPNHPDNLAPLEDANYEEIRASYRSAALSLHPDKLLKTSDTSSSDITTSERFLKVHKAWEVLSDSTTRLFYDKELKSSRREDFLASEVAEDLSLQDMTAEDVGETLELFYQCRCGDYYAVDSLELQKIGYSLSRDGNSINISILNVDTRPGSVILPCGSCSLKARLVLSMDNS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02666 231 Pfam DnaJ domain 70 130 IPR001623 -
Tsu02g02666 231 PRINTS DnaJ domain signature 63 81 IPR001623 -
Tsu02g02666 231 PRINTS DnaJ domain signature 105 125 IPR001623 -
Tsu02g02666 231 PRINTS DnaJ domain signature 81 96 IPR001623 -
Tsu02g02666 231 Gene3D DnaJ domain 60 138 IPR036869 -
Tsu02g02666 231 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 146 227 IPR007872 -
Tsu02g02666 231 SUPERFAMILY Chaperone J-domain 70 133 IPR036869 -
Tsu02g02666 231 Gene3D DPH Zinc finger 141 231 IPR036671 -
Tsu02g02666 231 CDD DnaJ 70 122 IPR001623 -
Tsu02g02666 231 ProSiteProfiles dnaJ domain profile. 61 133 IPR001623 -
Tsu02g02666 231 SUPERFAMILY CSL zinc finger 147 229 IPR036671 -
Tsu02g02666 231 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4 70 228 - -
Tsu02g02666 231 Pfam CSL zinc finger 150 225 IPR007872 -
Tsu02g02666 231 SMART dnaj_3 63 125 IPR001623 -
Tsu02g02666 231 PANTHER DPH3 HOMOLOG-RELATED 70 228 IPR044248 GO:0017183|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02666 Tsu-Chr2 27959056 27960853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02666 75 130 C2H2 Transcription Factor Family AT1G74250 46.429 6.70e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02666 K17867 - gmx:100814856 226.098