Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02658 ATGAACTATTTGCACAACGGCACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAACCTTCTTGTTGACAAAAATTGGGTTGTAAAGGTATGTGATTTTGGCTTGTCTCGAATGAAGTACAATACATTCCTTTCTTCTAGATCAACTGCGGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGATGTTTTTAGCTACGGGGTCATATTATGGGAGCTCTCTACTCTGCGGCAACCCTGGGGAGGAATGAATCCCATGCAAGTTGTTGTCGGTTTCCAGCATCGCCGTCTGGACATTCCAGATGATATATGCTATTTTTTGCATTATAGAGATCCAAAGTTGAGTCCCACTTTTGCTGAAACCATGGCATTACTGAAGCCATTGCAGAAGCCATTGCAGAAGCCAATTACTGGTTCTCAAGCGCAGAGAGCAAGTGCTTACAACACATCATCGCGGGTTGCTGAAAATCCTGCAGAATAG 510 0.4392 MNYLHNGTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKYNTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLRQPWGGMNPMQVVVGFQHRRLDIPDDICYFLHYRDPKLSPTFAETMALLKPLQKPLQKPITGSQAQRASAYNTSSRVAENPAE 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02658 169 PANTHER OS06G0232100 PROTEIN 1 142 - -
Tsu02g02658 169 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 142 - -
Tsu02g02658 169 ProSitePatterns Serine/Threonine protein kinases active-site signature. 11 23 IPR008271 GO:0004672|GO:0006468
Tsu02g02658 169 SUPERFAMILY Protein kinase-like (PK-like) 1 150 IPR011009 -
Tsu02g02658 169 MobiDBLite consensus disorder prediction 144 169 - -
Tsu02g02658 169 SMART serkin_6 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02658 169 Pfam Protein tyrosine and serine/threonine kinase 1 110 IPR001245 GO:0004672|GO:0006468
Tsu02g02658 169 Gene3D Transferase(Phosphotransferase) domain 1 1 151 - -
Tsu02g02658 169 ProSiteProfiles Protein kinase domain profile. 1 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02658 Tsu-Chr2 27855541 27856504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02658 1 153 MAP Kinase Kinase Kinase AT1G73660 72.222 1.12e-71 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tsu02g02658 PK_Tyr_Ser-Thr 1.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02658 - - ccaj:109799481 264.233