Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02620 ATGGCGGCTACTGTATCTGCTTGGTCCAAACCAGGTGCATGGGCACTTGATTCTGAGGAACACGAAGCTGAACTccttcaaaacaacaacaacaacaacaacgttgTTGAATCCAAACCACTCGCTGAATTCCCTTCTCTCGCTGTCGCCGCCGCAACAAAACCCAAAAAGAAGAAAGCCCAAACCCTATCTTTGGCTGAATTCACTGCCAAACCTGTTTCTTCATTCACTCATCAAGATCCGGTTGATCTTCCAACCGGTCCACGTCAGCGAACCGCTGAGGAACTCGAACGTGACCGGACTCGTATTGGTGGTGGCTTTGGATCTTACGGTGGTGGTCGTTCTAATCGGAATTCGGGGGATGATGAATCTTCTGTTTCAAGATGGGGTTCTTCTAGGGTTCCGAGAAACGATTCGTTTGGTTCTAGGGATAGGGATTCCAATCGTGACTCTGCACCTTCTAGGGCTGATGAAATTGATAATTGGGCTGCTGCTAAGAAACCTGTTGGGAATGGGGGGTCTGATAGAAGGGATAGAGGTGAAAGAGGTGGTTTTTTCGATTCGCAGTCGCGGGCTGATGAATCTGATAGCTGGGTTACGAATAAGAATTTTGTGCCGAGTGAAGGACGGAGatttggtggtggtggtggtgatagAGAGAGGAGAGTAGGGTTTGGGACTAGTGGTGGTGCTGATTCGGATAATTGGAATAAGAAAAAAGTTGGTGAATTTAGTGTTGCAAGTGAAAGAACTGAGAATGTTGGTGGTGGAAGGCCAAGGCTTGTTTTGCAACCGCGTTCTGCGCCGCCTAGTAATGAAAATCAGGATGTTCCTactgctgctgctgttgtttCTGGGAATGTAGCAAAGCCTAAGGGTTCAAATCCGTTTGGTGAGGCTAGACCAAGGGAGCAGGTTTTGGCGGAGAAAGGTCAGGATTGGAAGAAGATTGATGAGCAACTTGAGAGCATGAAGATTAAAGAGACAGCGGTCGTTGAAGGGTTTGGAAAGAGGGGTTTTGGTTCTGGTAATGGACGCGGTGAAGATCGATCTGAGAGGAGTTGGAGGAAATCAACCCCATCTGAGGATGGTCGTTCAGAAAGTGCTGAGAAAGTGGAGGATGAACAACACATTGAAGAAAACTGA 1146 0.4468 MAATVSAWSKPGAWALDSEEHEAELLQNNNNNNNVVESKPLAEFPSLAVAAATKPKKKKAQTLSLAEFTAKPVSSFTHQDPVDLPTGPRQRTAEELERDRTRIGGGFGSYGGGRSNRNSGDDESSVSRWGSSRVPRNDSFGSRDRDSNRDSAPSRADEIDNWAAAKKPVGNGGSDRRDRGERGGFFDSQSRADESDSWVTNKNFVPSEGRRFGGGGGDRERRVGFGTSGGADSDNWNKKKVGEFSVASERTENVGGGRPRLVLQPRSAPPSNENQDVPTAAAVVSGNVAKPKGSNPFGEARPREQVLAEKGQDWKKIDEQLESMKIKETAVVEGFGKRGFGSGNGRGEDRSERSWRKSTPSEDGRSESAEKVEDEQHIEEN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02620 381 MobiDBLite consensus disorder prediction 343 381 - -
Tsu02g02620 381 MobiDBLite consensus disorder prediction 190 204 - -
Tsu02g02620 381 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 371 - -
Tsu02g02620 381 MobiDBLite consensus disorder prediction 171 189 - -
Tsu02g02620 381 MobiDBLite consensus disorder prediction 332 381 - -
Tsu02g02620 381 MobiDBLite consensus disorder prediction 68 310 - -
Tsu02g02620 381 MobiDBLite consensus disorder prediction 112 137 - -
Tsu02g02620 381 Pfam Plant specific eukaryotic initiation factor 4B 7 326 IPR010433 GO:0003743
Tsu02g02620 381 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 371 IPR010433 GO:0003743
Tsu02g02620 381 MobiDBLite consensus disorder prediction 138 162 - -
Tsu02g02620 381 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02620 Tsu-Chr2 27336736 27339157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02620 1 358 Eukaryotic Initiation Factors Gene Family AT4G38710 51.276 1.98e-74 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02620 - - pvu:PHAVU_011G033300g 422.55