Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02612 ATGAAGGATGCAGATGTGTCAAAGCAAATCCAGCAGATGATTAGGTTCATCCGCCAAGAAGCTGAGGAGAAAGCTAATGAAATTTCTGTTTCTGCAGAGGAGGAATTCAACATTGAGAAACTACAATTACTTGAAGCTGAAAAAAGGAAGATCAGGCAAGAGTACGAGAAAAAAGCCAAACAGATTGATGTTCGTAGAAAGATTGAATACTCAATGCAGTTGAATGCATCTCGTATAAAGGTACTCCAAGCACAAGATGAGGTGGTAAATTCTATGAAAGATGCTGCTAAAAAGGGACTTTTGAAAATCTCAAATGATAAGAAAGTATACAGGAAACTCATCAAAGATCTTATTGTTCAGGGTCTACTACGTCTGAAGGAACCATCTGTGTTACTACGATGTAGAGAGGCTGATCGTAAGCTAGTTGAGTCATTGCTTGAAGAAGCCAAAAAGGAATACTCAGATAAAGCTAATGTGCAGCCCCCTAAGATTACCCTCGATGATCGTGTTTATCTTCCACCACAACCAAAAAATGGCGCTGTGGATTCGCATGAACCTTTTTGTTCTGGAGGAATAGTATTGGCCTCAGAGGATGGAAAGATAGTGTTGGAAAATACTCTTGATGCGCGACTTGATGTCATTTTTCGACAGAAGTTGCCTGAGATACGAAAGACTCTGTTAAGTTCAACTTAA 693 0.3954 MKDADVSKQIQQMIRFIRQEAEEKANEISVSAEEEFNIEKLQLLEAEKRKIRQEYEKKAKQIDVRRKIEYSMQLNASRIKVLQAQDEVVNSMKDAAKKGLLKISNDKKVYRKLIKDLIVQGLLRLKEPSVLLRCREADRKLVESLLEEAKKEYSDKANVQPPKITLDDRVYLPPQPKNGAVDSHEPFCSGGIVLASEDGKIVLENTLDARLDVIFRQKLPEIRKTLLSST 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02612 230 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 ISOFORM X1 1 228 - -
Tsu02g02612 230 Coils Coil 7 27 - -
Tsu02g02612 230 Coils Coil 38 61 - -
Tsu02g02612 230 Pfam ATP synthase (E/31 kDa) subunit 16 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Tsu02g02612 230 Hamap V-type proton ATPase subunit E [atpE]. 8 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Tsu02g02612 230 Gene3D - 92 230 IPR038495 -
Tsu02g02612 230 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Tsu02g02612 230 Gene3D - 1 62 - -
Tsu02g02612 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02612 Tsu-Chr2 27241567 27243724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02612 1 229 Primary Pumps ATPases(2) AT3G08560 69.869 3.24e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02612 K02150 - gmx:100779392 399.438