Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02581 ATGGCGTTACCGGTGGTGGTTGACGCTGAATATCTCAAAGAGATCGAAAAAGCTCGCCGCGATCTCCGAGCACTCATCGCCAACAGAAACTGCGCTCCTATCATGCTTCGCTTAGCGTGGCACGATGCCGGTACTTATGATGCTAAGACGAAAACCGGTGGACCTAATGGTTCAATCCGGAACGAGGAAGAGTATTCTCACGGCGCTAACAATGGattgaagaaagctattgatTTCTGTGAGGAAGTGAAAGAAAAACATCCTAAGATCTCATATGCAGACCTTTATCAGCTTGCGGGTGTTGTCGCAGTTGAGATTACTGGGGGTCCCACAGTCAACTTTGTTCCTGGAAGAAGGGATTCAAAAGTATGTACCAGAGATGGGCGACTTCCCGATGCTAAACAAGGCGTGTCACATCTCCGTGATATCTTTTATCGCATGGGCTTGACTGACAAGGATATTGTTGCACTGTCTGGAGCACATACTCTGGGAAGAGCACATCCAGATAGATCAGGGTTTGATGGCCCATGGACAGAGGACCCTCTGAAGTTTGATAACTCATATTTTCAGATACTTTTGGAACAAGATACTGCAGCGCTACTTAAACTTCCAACTGACAGGGCTTTATTGGATGATCCTGAATTTCGCCGTTATGTTGAGCTGTACGCGAAGGACGAGGATGCATTTTTTCAAGATTATGCTGAATCACATAAGAAACTTTCTGAGCTTGGCTTTGTGCCAAGTTCAAAGGCCACTGGTCCTAAGGATGCGACTGTACTGGCACAAAGCGCTGCTGGAGCTATAGTTGCCGCTGCAGTGGTGATCCTCGGTTACTTGTACGAGAATAGCAAAAGAGGGAAGAAGTAG 867 0.4614 MALPVVVDAEYLKEIEKARRDLRALIANRNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKKAIDFCEEVKEKHPKISYADLYQLAGVVAVEITGGPTVNFVPGRRDSKVCTRDGRLPDAKQGVSHLRDIFYRMGLTDKDIVALSGAHTLGRAHPDRSGFDGPWTEDPLKFDNSYFQILLEQDTAALLKLPTDRALLDDPEFRRYVELYAKDEDAFFQDYAESHKKLSELGFVPSSKATGPKDATVLAQSAAGAIVAAAVVILGYLYENSKRGKK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02581 288 PRINTS Plant ascorbate peroxidase signature 11 31 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Plant ascorbate peroxidase signature 32 47 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Plant ascorbate peroxidase signature 50 60 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Plant ascorbate peroxidase signature 64 88 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Plant ascorbate peroxidase signature 89 107 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Plant ascorbate peroxidase signature 108 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Plant ascorbate peroxidase signature 129 146 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Plant ascorbate peroxidase signature 147 168 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Plant ascorbate peroxidase signature 169 193 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Plant ascorbate peroxidase signature 221 245 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 ProSitePatterns Peroxidases active site signature. 32 43 IPR019794 GO:0004601
Tsu02g02581 288 PRINTS Haem peroxidase superfamily signature 32 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 1 287 IPR044831 GO:0004601|GO:0034599
Tsu02g02581 288 Coils Coil 8 28 - -
Tsu02g02581 288 Gene3D Peroxidase, domain 2 131 237 - -
Tsu02g02581 288 ProSitePatterns Peroxidases proximal heme-ligand signature. 153 163 IPR019793 -
Tsu02g02581 288 Gene3D - 18 244 - -
Tsu02g02581 288 ProSiteProfiles Plant heme peroxidase family profile. 32 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 Pfam Peroxidase 19 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g02581 288 CDD ascorbate_peroxidase 4 245 - -
Tsu02g02581 288 PANTHER L-ASCORBATE PEROXIDASE 4, PEROXISOMAL-RELATED 1 287 - -
Tsu02g02581 288 SUPERFAMILY Heme-dependent peroxidases 13 245 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02581 Tsu-Chr2 26673237 26678344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02581 35 244 Peroxidase AT4G31760 30.980 9.51e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02581 K00434 - gmx:100170727 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02581 02 26673237 26678344 Tsu02g02581 02 26673237 26678344 ECH