Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02572 ATGGAGGACGGTGAACTTGATTTCTCGAACCACGAAGTTTTTTCGAGTCCAAACATGGGTGAATTTCCAAGTAGCGGTTCAATGGATAGTTTTTTCGATGAACTTTTGAAAGATTCACACGCTTGTACTCACACTCACACGTGTAATCCACCGGGTCCTGATTTTTCACACACTCACACGTGTTATCATGTTCACACTAAAATTGTGCCTGCTGAGGATGATCAGGTTGGTACTGATGATACTGCTGAATCTGAGAAGAAGTCGAAGAAACGACCGGTGGGTAATAAAGAAGCGGTTAGGAAGTATCGTGAGAAGAAGAAAGCTAGGGCTGCGTCGTTGGAAGACGAGGTTATGAAATTGAGGGCTTTGAATCAGCATTTGATGAGGAAGTTGCAAGGACAGGCTGCTTTGGAAGCTGAAGTTGCTAGATTGAAGTGTTTGTTGGTTGATATAAGGGGAAGGATTGAAGGAGAAATTGGATCGTTTCCGTATCAGAAACCGACTAATACTAACCTTCCAGTTCAGAATTTGACTGGTTCTCATGTGATGAACCCTTGTAATGTGCAGTGTGATGATCGCGTATATTGCCTTCGTCCTGGAGCAGATGGGACGATTGCTGCAGAAGGGGCATCGCCAATTGAGGGAGGGTTTGATGGTTGTGAATTTGAGAATCTCCAGTGTCTGGCCGGCGAGAATTTTGGGCTAAAGGATCTTCATGGTTGTGGAGTTGGGCCAACAGTGTCTAATGTCAACTCTCAAGCTTCCAATAAAAGAAAAGGGGGTGCTCGTGCAGCAAAAGCAGGGTGA 807 0.4498 MEDGELDFSNHEVFSSPNMGEFPSSGSMDSFFDELLKDSHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPAEDDQVGTDDTAESEKKSKKRPVGNKEAVRKYREKKKARAASLEDEVMKLRALNQHLMRKLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKPTNTNLPVQNLTGSHVMNPCNVQCDDRVYCLRPGADGTIAAEGASPIEGGFDGCEFENLQCLAGENFGLKDLHGCGVGPTVSNVNSQASNKRKGGARAAKAG 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02572 268 PANTHER BASIC LEUCINE ZIPPER 23 1 238 - -
Tsu02g02572 268 MobiDBLite consensus disorder prediction 72 105 - -
Tsu02g02572 268 Gene3D - 75 151 - -
Tsu02g02572 268 SUPERFAMILY Leucine zipper domain 87 133 IPR046347 GO:0003700|GO:0006355
Tsu02g02572 268 MobiDBLite consensus disorder prediction 72 101 - -
Tsu02g02572 268 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 238 - -
Tsu02g02572 268 CDD bZIP 89 142 - -
Tsu02g02572 268 Pfam Basic region leucine zipper 84 140 IPR004827 GO:0003700|GO:0006355
Tsu02g02572 268 MobiDBLite consensus disorder prediction 11 25 - -
Tsu02g02572 268 MobiDBLite consensus disorder prediction 1 26 - -
Tsu02g02572 268 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 85 132 IPR004827 GO:0003700|GO:0006355
Tsu02g02572 268 SMART brlzneu 82 150 IPR004827 GO:0003700|GO:0006355
Tsu02g02572 268 Coils Coil 96 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02572 Tsu-Chr2 26478208 26481249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02572 1 267 bZIP Transcription Factor Family AT4G35040 64.207 9.02e-116 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g02572 bZIP_2 6.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02572 K25785 - gmx:780549 405.601