Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02564 atggGTATTCGTTTGCCATATATGGTTCTTCAAGCAAGACAGATATTCAAGTCCACTGCCTCAACATCACAGCTTCATAATGGATCAAAACAGTCCAACAATGTTCCAAAGGGACACATAGCAGTTTATGTTGGAGAGTTGCAAAAGAAGAGGTATGTGGTTCCAATATCATACTTGAACCATCCTACCTTTCTTGATTTGCTTAACAGAGCTGAAGAAGAGTTTGGCTACAATCATCCTATGGGTGGTCTCACTATTCCTTGCAAAGAAGATGCATTCATCAATCTTACATCTCAACTACGTTCCTTGTGA 312 0.391 MGIRLPYMVLQARQIFKSTASTSQLHNGSKQSNNVPKGHIAVYVGELQKKRYVVPISYLNHPTFLDLLNRAEEEFGYNHPMGGLTIPCKEDAFINLTSQLRSL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02564 103 Pfam Auxin responsive protein 17 98 IPR003676 GO:0009733
Tsu02g02564 103 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 102 - -
Tsu02g02564 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02564 Tsu-Chr2 26376133 26376444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02564 9 98 Calmodulin-binding Proteins AT4G34750 41.935 2.10e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02564 K14488 - cam:101504274 163.31