Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02563 ATGGGTTTTGTTATGCTTGTAAAGATGATTCAACATGCAAAGCAAAGGTTACAACTAGGGTCTCAAAGCTACTCAAAGCACCATTTTTTAGGAGAAATTAGTTCCAAGAAAATTGTTCATGTACCAAAAGGACATTTTGCTATTTATGTGGGTGATAAGGATGATGAATATATGAAGCGTTTTGTGGTCCCAATATCTTACTTGAAACAACCTATGTTTCAAGCTTTGTTGAGTTGTGCTGAGGAAGAGTTTGGTTTTGAACACCCAATGGGAAATATTGTTATTCCATGTTCCATTCATTATTTTGTTACTCTCACTTCTCGTTTCAATCCTTCATAG 339 0.351 MGFVMLVKMIQHAKQRLQLGSQSYSKHHFLGEISSKKIVHVPKGHFAIYVGDKDDEYMKRFVVPISYLKQPMFQALLSCAEEEFGFEHPMGNIVIPCSIHYFVTLTSRFNPS 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02563 112 Pfam Auxin responsive protein 23 106 IPR003676 GO:0009733
Tsu02g02563 112 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 34 110 - -
Tsu02g02563 112 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 34 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02563 Tsu-Chr2 26366400 26366738 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02563 40 102 Calmodulin-binding Proteins AT5G20810 46.032 2.79e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02563 K14488 - cam:101505472 158.303