Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02559 ATGGGTTTTCGTTTCCCTGCTATCATCAGAATGACATCATTTAATGCAAACCGAGCAGTTTCAAAAGATGAAGTACCTAAGGGATATCTTGCAGTGTATGTTGGAGATAAACAAAAGCGGTATGTGATCCCCATATCCTACTTGAACCAACCGTTGTTTCAAGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATACGATCATCCAACGGGTGGCCTCACCATTCCTTGTACCGAAGATGTCTTTCAACATTTAACATCTCGCTTGAATTGA 273 0.4139 MGFRFPAIIRMTSFNANRAVSKDEVPKGYLAVYVGDKQKRYVIPISYLNQPLFQDLLSQAEEEFGYDHPTGGLTIPCTEDVFQHLTSRLN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02559 90 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
Tsu02g02559 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 6 90 - -
Tsu02g02559 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02559 Tsu-Chr2 26332009 26332613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02559 24 85 Calmodulin-binding Proteins AT3G43120 54.839 6.52e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02559 K14488 - gmx:100816803 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02559 02 26332009 26332613 Tsu02g02559 02 26332009 26332613 ECH