Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02551 ATGGGTTTTCGTTTCCCTGCTATCATCAGAATGGCATCATTTAATGCAAACCGAACAGTTTCAAAAGACGATGTACCTAAGGGATATCTTGCAGTGTATGTTGGAGACAAACAAAAGCGGTATGTGATCCCTGTATCCTACTTGAACCAACCGCTGTTTCAAGACTTGTTGAGTCAATCTGAGGAAGAGTTTGGATACGATCATCCAACGGGTGGCCTCACCATTCCTTGCACTGAAGATGTCTTTCAACATATAGCATCTCGCTTGAATGGACTATGA 279 0.4265 MGFRFPAIIRMASFNANRTVSKDDVPKGYLAVYVGDKQKRYVIPVSYLNQPLFQDLLSQSEEEFGYDHPTGGLTIPCTEDVFQHIASRLNGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02551 92 Pfam Auxin responsive protein 15 88 IPR003676 GO:0009733
Tsu02g02551 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 90 IPR003676 GO:0009733
Tsu02g02551 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 6 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02551 Tsu-Chr2 26246080 26246358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02551 24 85 Calmodulin-binding Proteins AT3G43120 53.226 7.26e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02551 K14488 - gmx:100816803 150.984