Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02550 ATGGGTTTCCGCAGTCTTATCAGAAAGGCATCATTTTCCAAAACTCAAGGATCTACCAAGGGATCTGAAATCCCAAAAGGCTATCTCGCAGTCTATGTTGGAGATGAAATGAGACGATTCGTGATTCCAATATCATACTTAAACCAACCATTGTTTCAAGCGTTGCTACATCAAGCAGAAGAAGAATTTGGATATGAACATCCAATGGGTGGTCTCACAATTCCATGCAATGAGGATGAATTCATAAACCTCACTTCACACGGACAATTGGATGTAATCGGCTACTCAGATTATGACTTTTCCGGCTGTGTTGATGCTCGCAAATCAACATCAAGattaaagagaatgaaaaaaagaaagtga 363 0.3774 MGFRSLIRKASFSKTQGSTKGSEIPKGYLAVYVGDEMRRFVIPISYLNQPLFQALLHQAEEEFGYEHPMGGLTIPCNEDEFINLTSHGQLDVIGYSDYDFSGCVDARKSTSRLKRMKKRK 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02550 120 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 4 87 IPR003676 GO:0009733
Tsu02g02550 120 Pfam Auxin responsive protein 11 85 IPR003676 GO:0009733
Tsu02g02550 120 PANTHER AUXIN-INDUCED PROTEIN 10A5 4 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02550 Tsu-Chr2 26237504 26239419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02550 13 81 Calmodulin-binding Proteins AT3G43120 50.725 1.40e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02550 K14488 - gmx:100789280 139.813