Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02549 ATGGGTTTTCGTTTATCTGGTATCATTAAAAGGGCATCACTCGTTGCAAACCGAGCAGCTTCAAAAGCGGTGGACATGCCGAAGGGATATCTTGCAGTGTATGTTGGAGAGAAACAAAAGCGATTTGTGATCCCCATATCATACTTGAACCAACCATCGTTTCAAGACTTGTTGAGTCAAGCGGAGGAAGAGTTTGAATACAATCACCCCATGGGTGGTCTCACCATTCCTTGCACAGAAGATGTCTTTCAACATATAACATCTCGCTTCAATGGACTATGA 282 0.4326 MGFRLSGIIKRASLVANRAASKAVDMPKGYLAVYVGEKQKRFVIPISYLNQPSFQDLLSQAEEEFEYNHPMGGLTIPCTEDVFQHITSRFNGL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02549 93 Pfam Auxin responsive protein 17 88 IPR003676 GO:0009733
Tsu02g02549 93 PANTHER AUXIN-INDUCED PROTEIN 6B 6 91 - -
Tsu02g02549 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02549 Tsu-Chr2 26236266 26236547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02549 25 86 Calmodulin-binding Proteins AT3G43120 50.000 5.88e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02549 K14488 - gmx:100816803 151.369