Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02547 ATGGGTTTTCGTTTACCTGGTATCATCAGAAGGGCTGCAAACCAACCATCTTCAAAAGGTGTGGATGTGCCAAAGGGATATCTTGCCATATATGTTGGAGAGGAAATGAAGCGGTTTGTGATCCCAATATCATACTTAAACCAACCGTCATTTCAAGAATTGTTGAATCAAGCTGAGGAACAATTTCAATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGAGAAGTTGTGTTCTTAGATATCACTTCTCGTTTGAGTAGGTGCTAA 273 0.4029 MGFRLPGIIRRAANQPSSKGVDVPKGYLAIYVGEEMKRFVIPISYLNQPSFQELLNQAEEQFQYDHPMGGLTIPCREVVFLDITSRLSRC 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02547 90 Pfam Auxin responsive protein 14 86 IPR003676 GO:0009733
Tsu02g02547 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 3 87 IPR003676 GO:0009733
Tsu02g02547 90 PANTHER SMALL AUXIN-UP RNA-RELATED 3 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02547 Tsu-Chr2 26231727 26231999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02547 22 80 Calmodulin-binding Proteins AT3G43120 54.237 5.01e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02547 K14488 - gmx:106795237 144.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02547 02 26231727 26231999 Tsu02g02547 02 26231727 26231999 ECH