Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02546 ATGGGTTTCCGTTTACATGCTATTCTAAGGACATCAGTAACAGCTAGACAAGCAACATCAAAATATGTAGAAGTGGGAAAGGGCTATGTAGCAGTGTATGTTGGAGAGAAACATAAGCGGTTTATAATCCCAGTATCATACTTGAACCAACCTTCATTTCAAGAATTGTTAAGTCAAGTTGAGGAAGAGTTTGGATATGATCATTCCATGGGTGGACTCGTCATTCCTTGCACCGAAGACATCTTCCAACATATAACTTCTTGCCTGAATGGGCTATGA 279 0.3978 MGFRLHAILRTSVTARQATSKYVEVGKGYVAVYVGEKHKRFIIPVSYLNQPSFQELLSQVEEEFGYDHSMGGLVIPCTEDIFQHITSCLNGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02546 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 8 90 - -
Tsu02g02546 92 Pfam Auxin responsive protein 15 89 IPR003676 GO:0009733
Tsu02g02546 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02546 Tsu-Chr2 26230777 26231055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02546 14 91 Calmodulin-binding Proteins AT3G43120 43.590 2.01e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02546 K14488 - gmx:112997793 144.05