Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02545 ATGGGTTTCCGTTTAAATGTTATTCGACGGGCATCATTGACTTCCATCCAAACAGCATCAAAATCTGCAGAAGTGAGAAAGGGCTATGTTGCAGTGTATGTTGGAGAGAAACAGAAGCGGTTTGTGATCCCAATATCATACTTGAACCAACCATCATTTCAAGACTTATTGAGTCAAGTTGAGGAAGAGTTTGGATATGGCCATCCCATGGGTGGCCTCACCATTCCTTGCACCGAAGATGTGTTTCAACACATAACTTCTCGCTTTAATGAGCTATGA 279 0.4229 MGFRLNVIRRASLTSIQTASKSAEVRKGYVAVYVGEKQKRFVIPISYLNQPSFQDLLSQVEEEFGYGHPMGGLTIPCTEDVFQHITSRFNEL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02545 92 Pfam Auxin responsive protein 14 87 IPR003676 GO:0009733
Tsu02g02545 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Tsu02g02545 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02545 Tsu-Chr2 26221830 26222108 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02545 14 85 Calmodulin-binding Proteins AT3G43120 43.056 7.75e-17 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02545 K14488 - gmx:100816803 152.14