Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02544 ATGGGTTTTCGTTTACCTAATATCATCAGATCAAAGGCATCATCTTCAAAAGGTGTCCCAAAGGGATATCTAGCTGTGTATGTAGGAGACAAAATGAAGAGGTTTGTGATTCCCGTATCATACTTGAACCAAATCTCATTCCAAGACTTACTGGGCCAATCTGAAGAACAATTCGGATTTGACCATCCAATGGATGGTATAACTATTCCTTGCCGAGAAGATGTTTTCTTAGAAGTCACTTCAAGCTTGAATTGA 255 0.3882 MGFRLPNIIRSKASSSKGVPKGYLAVYVGDKMKRFVIPVSYLNQISFQDLLGQSEEQFGFDHPMDGITIPCREDVFLEVTSSLN 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02544 84 Pfam Auxin responsive protein 13 83 IPR003676 GO:0009733
Tsu02g02544 84 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 84 IPR003676 GO:0009733
Tsu02g02544 84 PANTHER SMALL AUXIN-UP RNA-RELATED 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02544 Tsu-Chr2 26220929 26221183 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02544 19 76 Calmodulin-binding Proteins AT3G43120 51.724 6.41e-17 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02544 K14488 - gmx:100782363 126.716