Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02542 ATGGGGTTTCCTTTACCTAGTATCATCAGAAAGACTTCATCTTCAAAAGGTGTGGATGTTCCAAAGGGATATCTTTCCGTATATGTAGGAGAGGAAATGAAGCGATTTGTGATCCCAATATCATACTTGAAGAAATCATCGTTTCAAGAATTGTTGAATCAAGCTGAGGAACAGTTCGGATATGACCATCCAACAGGTGGTCTCACAATTCCTTGCAGAGAAGAAGTCTTCTTAGATATTACTTCTCGTTTGAATCTGGGCTAA 264 0.3902 MGFPLPSIIRKTSSSKGVDVPKGYLSVYVGEEMKRFVIPISYLKKSSFQELLNQAEEQFGYDHPTGGLTIPCREEVFLDITSRLNLG 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02542 87 Pfam Auxin responsive protein 14 83 IPR003676 GO:0009733
Tsu02g02542 87 PANTHER SMALL AUXIN-UP RNA-RELATED 1 85 - -
Tsu02g02542 87 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02542 Tsu-Chr2 26187762 26188486 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02542 19 77 Calmodulin-binding Proteins AT3G43120 59.322 7.99e-21 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02542 K14488 - gmx:100782363 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02542 02 26187762 26188486 Tsu02g02542 02 26187762 26188486 ECH