Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02539 ATGGGTTTTTGTTTACACGCTATTCTACGGGCATCAGTAACAGCTAGACAAGCAATATCAAAATCTGTAGAAGTGAGAAAGGGCTATGTAGCAGTGTATGTTGGAGAGACACAGAAGCGGTTTGTAGTCCCTGTGTCTTACTTGAACCAACCTTCATTTCAAGAATTGTTGAGCCAAGCTGAAGAAGAATTTGGATATGATCACCCGATGGGTTGCCTTACCATTCCTTGCACCGAAGATGTCTTCCAACATATAATTTCTTGCTTTAATGGGCTATGA 279 0.4122 MGFCLHAILRASVTARQAISKSVEVRKGYVAVYVGETQKRFVVPVSYLNQPSFQELLSQAEEEFGYDHPMGCLTIPCTEDVFQHIISCFNGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02539 92 Pfam Auxin responsive protein 17 88 IPR003676 GO:0009733
Tsu02g02539 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 90 IPR003676 GO:0009733
Tsu02g02539 92 PANTHER AUXIN-INDUCED PROTEIN 6B 2 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02539 Tsu-Chr2 26184346 26184624 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02539 17 91 Calmodulin-binding Proteins AT3G43120 42.667 3.36e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02539 K14488 - gmx:112997793 142.51