Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02536 ATGTTTTCAGTTTCCAATCAAGCAATTTCAGTTTCCGCAGGACATCCGTTCCTAAAGAACCATTTTGCAACTTTTGGTCAGAATATGAATGGTGCTAATGTGAAGCAACCACTACTTACCTGTTACAAAACCTCATTTGTTCATCCAATTGTTGGTACTGTTGCTGGTTTGACTGAACCATGTGTGAAACCATCTGCATCTTCTTCTCAACTTACCATGTTCTATTCCGGTACTGTGAAGATCTTCAATGATATCGCTCCTGAGAAGGCACAAGCCATCATGTTGTTGGCTGGAAATGGTATATCTGCAGCTTCAAACATGGTTCAACATGAAGTTCAGGCACCTAGTTCAAAGTTCGCATCAGGTGATGATGGTGTGCCTATGAGTCCACTTGTAAATAGACCACCCTCCTCTGGTATTTCTAGTCCTTTATCTGTTTCTTCACACACCGGTCCACAGTTAGGGAGTGGCTCATGTAGCAGTGATGAATTTCTAGCTGCTAAAACATCTAGAGGTCCTACTCCTACGACTTCTGCAAGCAAAGTGGAGACACCAAAAGTAGTCAGCTATACCTCAGGCCCACAAAGCATCATTGACTCGATTTTTGGAGAACCGCAAGGAGAGGGTGATCGACTGCAGCACCATATAACCTCAACAACAAGAAGTCCGAGGATGCTCCAATGCCAAATTCAATGGTTGCAGCGAAGCAATGATAACAGTAAGTAA 726 0.4325 MFSVSNQAISVSAGHPFLKNHFATFGQNMNGANVKQPLLTCYKTSFVHPIVGTVAGLTEPCVKPSASSSQLTMFYSGTVKIFNDIAPEKAQAIMLLAGNGISAASNMVQHEVQAPSSKFASGDDGVPMSPLVNRPPSSGISSPLSVSSHTGPQLGSGSCSSDEFLAAKTSRGPTPTTSASKVETPKVVSYTSGPQSIIDSIFGEPQGEGDRLQHHITSTTRSPRMLQCQIQWLQRSNDNSK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02536 241 SMART tify_2 64 99 IPR010399 -
Tsu02g02536 241 MobiDBLite consensus disorder prediction 134 161 - -
Tsu02g02536 241 PANTHER PROTEIN TIFY 6B-LIKE ISOFORM X1 1 184 - -
Tsu02g02536 241 Pfam tify domain 66 98 IPR010399 -
Tsu02g02536 241 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 184 IPR040390 -
Tsu02g02536 241 ProSiteProfiles Tify domain profile. 64 99 IPR010399 -
Tsu02g02536 241 MobiDBLite consensus disorder prediction 116 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02536 Tsu-Chr2 26178779 26179504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02536 1 102 Tify Gene Family AT3G17860 42.857 9.91e-14 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tsu02g02536 tify 9.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02536 K13464 - gmx:100799314 216.468