Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02528 ATGGGTTTTCGTCTACCTAGTATCACCAAAAGGGCTTCATCTTCAAAAGCTGCAAACGTGCCAAAAGGATATCTTGCAGTGTACGTTGGAGAGGAAATGAAGCGGTTTGTGATCCCTTTATCATACTTGAACAATACCTCAATTCAAGAGTTGTTGAGCCAAGCTGAGGAACAATACGGATATGACCATCCAATGGGTGGTATCACTATTCCTTGCAGAGAAGACATTTTCTTAGATATCACTTCTCGCTTGAACTGA 258 0.4147 MGFRLPSITKRASSSKAANVPKGYLAVYVGEEMKRFVIPLSYLNNTSIQELLSQAEEQYGYDHPMGGITIPCREDIFLDITSRLN 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02528 85 Pfam Auxin responsive protein 10 83 IPR003676 GO:0009733
Tsu02g02528 85 PANTHER SMALL AUXIN-UP RNA-RELATED 1 85 - -
Tsu02g02528 85 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02528 Tsu-Chr2 26142865 26143410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02528 19 77 Calmodulin-binding Proteins AT3G43120 54.237 2.75e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02528 K14488 - gmx:100795597 136.346