Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02527 ATGGGTTTCCGTTTAAATGTTATTCGACATGCATCAGTAACTGCCAACCAAACAGCATCAAAATCTGCAGAAGTGAGAAAGGGCTATGTTGCAGTGTATGTTGGAGAGAAACAGAAGCGGTTTGTGATCCCAATATCATACTTAAACCAACCATCATTCCAAGACTTATTGAGTCAAGCTGAGGAAGAGTTTGGATATAACCATCCAATGGGTGGCCTCACCATTCCTTGCAGCGAAGATGTGTTTCAACACATAACTTGTCGCTTGAATGAGCTATGA 279 0.4158 MGFRLNVIRHASVTANQTASKSAEVRKGYVAVYVGEKQKRFVIPISYLNQPSFQDLLSQAEEEFGYNHPMGGLTIPCSEDVFQHITCRLNEL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02527 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Tsu02g02527 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Tsu02g02527 92 Pfam Auxin responsive protein 12 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02527 Tsu-Chr2 26142071 26142349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02527 14 85 Calmodulin-binding Proteins AT3G43120 44.444 1.33e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02527 K14488 - gmx:100816803 157.532