Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02526 ATGACTTCTGGATGTGTTAAAGGCAATTTATCAAGGGCATCATCTTCAAAAGGCGCGGATGTTCCAAAAGGATATCTAGCAGTGTatgtaggagagaaaatgaaacgGTTTGTGATTCCCGTATCATACTTGAACCAAACCTCATTCCAAGAATTGCTGAGCCAAGCTGAGGAACAATTCGGATATGACCATCCAATGGGTGGTATAACTATTCCTTGCAGAGAAGATGTTTTCTTAGAAATCACTTCAAGCTTGAATTGA 261 0.3678 MTSGCVKGNLSRASSSKGADVPKGYLAVYVGEKMKRFVIPVSYLNQTSFQELLSQAEEQFGYDHPMGGITIPCREDVFLEITSSLN 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02526 86 Pfam Auxin responsive protein 13 85 IPR003676 GO:0009733
Tsu02g02526 86 PANTHER SMALL AUXIN-UP RNA-RELATED 11 86 - -
Tsu02g02526 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02526 Tsu-Chr2 26138092 26138941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02526 14 78 Calmodulin-binding Proteins AT3G43120 50.769 4.24e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02526 K14488 - gmx:100815438 127.872