Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02523 ATGGGATTCCGGTTACCTGGTATCAGAAGATCATCTTCCAAGGCTGTGGATGAAGTCCCAAAAGGCTACCTTGCAGTTTATGTTGGAGAGAAAATGAAGCGGTTTATGATTCCAATTTCATCTTTGAATCAACCTTCATTTCAAGAATTGTTAAGCCTGTCAGAAGAAGAATTTGGATATGAACATCCAATGGGTGGTCTCACAATTCCTTGCAGCGAAGACACTTTCTCAGAACTCACTTCTCGATTCAATGTTAAATAA 261 0.3946 MGFRLPGIRRSSSKAVDEVPKGYLAVYVGEKMKRFMIPISSLNQPSFQELLSLSEEEFGYEHPMGGLTIPCSEDTFSELTSRFNVK 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02523 86 PANTHER AUXIN-INDUCED PROTEIN 15A 7 84 - -
Tsu02g02523 86 Pfam Auxin responsive protein 13 81 IPR003676 GO:0009733
Tsu02g02523 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 7 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02523 Tsu-Chr2 26127502 26127962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02523 18 79 Calmodulin-binding Proteins AT3G43120 53.226 4.75e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02523 K14488 - gmx:100806671 127.487