Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02520 ATGGGTTTCCGCATAACAAGTATTATCAAAAGGGCGTCATTTTCCATAACCGAAGGATCTACCAAGGGTTTTAAAGTCCCAAAAGGCTATCTTGCGGTCTACGTTGGAGATAGAATGAGACGGTTTGTGATTCCAGTATCATACTTGAACCAACCATTGTTTCAAGAATTACTACATCAATCAGAAGAAAAATTTGGATATGATCATCCAATGGGTGGTCTCACAATTCCGTGCAACGAGGATGAATTCCTAAACCTCACTTCTCGCTTAAGTGAGTTGTAG 282 0.4007 MGFRITSIIKRASFSITEGSTKGFKVPKGYLAVYVGDRMRRFVIPVSYLNQPLFQELLHQSEEKFGYDHPMGGLTIPCNEDEFLNLTSRLSEL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02520 93 Pfam Auxin responsive protein 14 89 IPR003676 GO:0009733
Tsu02g02520 93 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 91 - -
Tsu02g02520 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02520 Tsu-Chr2 26082516 26082797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02520 26 83 Calmodulin-binding Proteins AT3G43120 56.897 6.23e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02520 K14488 - gmx:100786095 153.68