Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02516 ATGGGTTTCCGCAGTCTTATCAGAAAGGCATCATTTTCCAAAACTCAAGGATCTACCAAGGGATCTGAAATCCCAAAAGGCTATCTCGCAGTCTATGTGGGAGATCAAATGAGACGGTTCGTGATTCCAGTGTCATATTTGAACCAACCTTTGTTTCAAGACCTACTAAATCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGAGGTCTAACAATTCCGTGCAGTGAGGATGAATTCGTAAACCTCACTTCTCGCTTGAATTGA 270 0.4148 MGFRSLIRKASFSKTQGSTKGSEIPKGYLAVYVGDQMRRFVIPVSYLNQPLFQDLLNQAEEEFGYDHPMGGLTIPCSEDEFVNLTSRLN 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02516 89 PANTHER AUXIN-INDUCED PROTEIN 10A5 4 89 - -
Tsu02g02516 89 Pfam Auxin responsive protein 11 87 IPR003676 GO:0009733
Tsu02g02516 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 4 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02516 Tsu-Chr2 26046448 26047018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02516 23 81 Calmodulin-binding Proteins AT3G43120 57.627 1.15e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02516 K14488 - gmx:100786095 148.673