Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02514 atggCCATTAAGAAATACTCAAACAAACTTCCTCAAAATGCAGTCTTGAAACAAATCCTCAAAAGATGTTCAAGCTTAGGAAAGAAAAACGATTATAACAATGATAATGATTACCCTGTTGATGTCCCAAAAGGTCATTTTGCTGTTTATGTTGGTGAAAACAGAAGTAGATATATTGTTCCAATCTCATTTTTAACTCACCCTGAGTTTCAATCACTACTTCGTCAAGCTGAAGAAGAATTTGGCTTTGATCATGATATGGGTCTTACCATTCCTTGTCAAGAATGGCTCCCTGCACAAACCGCAACAACCATTAATGGCGCTTTCGCACTAACAGCCCAAGTCAGAGACAGGGATAAACGACAACAGATGCCACAAACCCGAGAAGATGCAGCCATCATACACATAACTGGCTTAAAAGAATCTGGCAAGACCCAGATCCGCCACCACACGACCCTTGCGAATCTGCACATCGACGATGAGTCAATGGATGACAACAAGAGACCAGGAAAACACGTAGAAGCTTGGACTGCCTGA 537 0.4134 MAIKKYSNKLPQNAVLKQILKRCSSLGKKNDYNNDNDYPVDVPKGHFAVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCQEWLPAQTATTINGAFALTAQVRDRDKRQQMPQTREDAAIIHITGLKESGKTQIRHHTTLANLHIDDESMDDNKRPGKHVEAWTA 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02514 178 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 96 - -
Tsu02g02514 178 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 96 IPR003676 GO:0009733
Tsu02g02514 178 Pfam Auxin responsive protein 28 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02514 Tsu-Chr2 26027776 26029528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02514 39 94 Calmodulin-binding Proteins AT3G43120 58.929 1.31e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02514 K14488 - oeu:111410569 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02514 02 26027776 26029528 Tsu02g02514 02 26027776 26029528 ECH
Tsu02g02514 02 26027776 26029528 Tsu05g00826 05 7046510 7047186 ECH
Tsu02g02514 02 26027776 26029528 Tsu04g03498 04 44173541 44174374 ECH