Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02510 ATGGGAGATAGTGAAGATGGTAACAATGAAATGCTTCAAAGACttcattcttcttcatcttttatGAAACAACAACTGAACAATCATATGGAACAATTAAGTATACCTCAGTTTAGTTCCTCCTCACAAATGAGAACCGTTGGTagaaatcatcatcataatcaaagGGCAGGTATTCCACCATCACACCCACATCAGATCCCGCCTATTTCACCATACTCTCAGATCCCGGTTTCACGGACGCAAATGTCTTCTCATAATACTAGTCCTACACCTTCCCACACTCGATCACTCTCTCAACCGTCTTTTTTCTCTCTCGATTCTCTTCCACCTCTTAGCCCTTGTTCGTTTCGCGAATCTTCGGACAATAACAACAACAGCGCTGACGTGTCAATGGAAGATCGTGACGTCACTTCTCACTCTCCGTTACCTCCGTTTGCTAGAAACCCTTCTTTACCACCTCGGAAATCGCACCGTCGTTCTAACAGTGATATTCCGTTTGGATTTTCAACCGTTTTGCAATCTTCTCCACCGTTGATTCCTCTCAGAGGAAGAGAACTTGGTAAACCTAATTCGTCGGTGGTGAAAAGAGAATTTGAACATAGTAATAGTAATGTAGAGGAGAAGAAATCTTTATCTCCTGAAGGTGAAGTTGTGGATGATCTTTTCTCTGCTTATATGAATTTGGATAATATTGATGCAATTAACTCGTCTGGGACCGATGATAAAAATGTCGCGGTTGATAATAATCGCGATGATTTGGATAGTAGAGCGAGTGGAACGAAGACAAATGGCGGTGATAGTAGTGATAATGAAGCTGAAAGTAGTGTTAATGAAAGTGGGGATAGTATGCAGAGGAGGGAAGGGATGAAGAGAAGTGCAGGAGGTGATATTGCACCTACTAGTAGACATTATAGGAGTGTGTCGATGGATAGTTTTATCGGGAAGTTGAATTTCAACGATGAGTCATTTAAGCTACCGCCTTCACCTGGAGGATTGGTTTCTCCGGGTAATTCGGGTGATGGGAATTCGGCAGCTTTTAGTTTGGAGTTTGGGAACGGTGAGTTTAGTGGGCCGGAATTGAAGAAAATTATGGCTAATGAAAAACTTGCTGAGATTGCTATGGCTGATCCCAAGCGTGCTAAGAGGATTTTGGCTAATAGGCAATCGGCTGCGCGATCGAAAGAACGCAAGATGCGTTACATTTCAGAGCTAGAACACAAGGTTCAGACTCTGCAGACTGAAGCTACTACACTTTCTGCACAACTTACTCTGTTGCAGAGAGATTCTGTTGGACTCACTAACCAGAATAGTGAGTTGAAGTTCCGCCTTCAATCCATGGAACAACAGGCAAAACTCCGAGATGCTCTGAATGAGGCGCTTACTGCTGAGGTTCAAAGACTGAAGATAGCTACAGCTGAGCTGAATGGGGAGTCACATCCTTCTAACTGCATGATTCCGCAACATTCTGGAAACTCTATGATGTTCCAACAACAGCATCAACCTCCTACATCTCAGCAAAACAATCATATTCAACAGCAtcaacaacagcagcagcagcagcatcAGCAACAACAGCAGAATGGTAATGCCAACTCAAAGAATGAGTTAAAGCAGTAA 1620 0.4136 MGDSEDGNNEMLQRLHSSSSFMKQQLNNHMEQLSIPQFSSSSQMRTVGRNHHHNQRAGIPPSHPHQIPPISPYSQIPVSRTQMSSHNTSPTPSHTRSLSQPSFFSLDSLPPLSPCSFRESSDNNNNSADVSMEDRDVTSHSPLPPFARNPSLPPRKSHRRSNSDIPFGFSTVLQSSPPLIPLRGRELGKPNSSVVKREFEHSNSNVEEKKSLSPEGEVVDDLFSAYMNLDNIDAINSSGTDDKNVAVDNNRDDLDSRASGTKTNGGDSSDNEAESSVNESGDSMQRREGMKRSAGGDIAPTSRHYRSVSMDSFIGKLNFNDESFKLPPSPGGLVSPGNSGDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIAMADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELNGESHPSNCMIPQHSGNSMMFQQQHQPPTSQQNNHIQQHQQQQQQQHQQQQQNGNANSKNELKQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02510 539 MobiDBLite consensus disorder prediction 477 539 - -
Tsu02g02510 539 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 69 537 - -
Tsu02g02510 539 MobiDBLite consensus disorder prediction 72 132 - -
Tsu02g02510 539 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 377 440 IPR004827 GO:0003700|GO:0006355
Tsu02g02510 539 MobiDBLite consensus disorder prediction 259 283 - -
Tsu02g02510 539 Coils Coil 458 478 - -
Tsu02g02510 539 MobiDBLite consensus disorder prediction 235 303 - -
Tsu02g02510 539 MobiDBLite consensus disorder prediction 1 215 - -
Tsu02g02510 539 Pfam bZIP transcription factor 379 433 IPR004827 GO:0003700|GO:0006355
Tsu02g02510 539 MobiDBLite consensus disorder prediction 163 177 - -
Tsu02g02510 539 Coils Coil 395 429 - -
Tsu02g02510 539 CDD bZIP_plant_RF2 380 429 IPR044759 GO:0003700|GO:0006355
Tsu02g02510 539 SMART brlzneu 375 439 IPR004827 GO:0003700|GO:0006355
Tsu02g02510 539 MobiDBLite consensus disorder prediction 190 215 - -
Tsu02g02510 539 MobiDBLite consensus disorder prediction 11 48 - -
Tsu02g02510 539 Gene3D - 378 430 - -
Tsu02g02510 539 SUPERFAMILY Leucine zipper domain 379 430 IPR046347 GO:0003700|GO:0006355
Tsu02g02510 539 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 69 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02510 Tsu-Chr2 25872893 25876974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02510 1 498 bZIP Transcription Factor Family AT4G38900 57.757 4.88e-170 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g02510 bZIP_1 5.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02510 - - mtr:MTR_4g072090 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02510 02 25872893 25876974 Tsu02g02510 02 25872893 25876974 ECH