Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02493 ATGGAGTTCGTTCTGCAATATGTTGAACCTTCAaatcttatttttcttctcatCTCTCTCACAACTTTTGTTCTTTTCTCACTTGTCCTTCAGAGAAAAAAACTCCCATACCCACCAGGCCCAAAGGGACTACCCATCATTGGGAACATGTTGATGATGGACCAGCTAACCCACCGTGGTCTCGCACGACTCGCTGAGAAGTTTGGTGGATTTTGCCACCTCCAAATGGGTGCCATTCACATTGTGGCCATTTCAACACCAGAAATGGCCCGCGAAGTCCTTCAGACTCAAGATAGTGTTTTCTCAAATCGGCCGGCTAACATTGCAATCACCTACTTAACCTATGACCGGGCTGACATGGCGTTTGCAAATTACGGTCCATTTTGGAGACAAATGCGTAAAATATGTGTCATGAAATTATTTAGCCGTAAACGGGCTGAATCATGGGCTTCCGTAAGAGAGGAAGTCGAGACAATGATTCAAACAGTTTCCTCTAAAGCCGGTTTACCTGTTAATTTAGGTGAACTAATTTTCTCTCTTACGAGGAGCATCACCTTTAAGGCTGCGTTTGGATCCAATCTAAACAAAGGCCAAGAAGAATTCATGGGAATTTTGCAAGAATTTTCCAAACTTTTCGGAGCTTTCGACATTGCCGAATTTATTCCATGGTTGGGTTGGTTTAATGGACAAGATTTCAACAAAAGATTGGCTAGTGCAAGAAAAGCACTTGATGTGTTTATTGACGAGATTATTGATGATCATGTcacaaagaaaaacaacatgAAGAATAAAGATATTGAGAATGAAGAAGATGTTGATATGGTTGATGAACTAATGGACTTCCTTGATGAGAGAGATGGTGCTGCTGCGGAAATTTCACAATCGGGGCTTAAGCTTACTAGAGATAATATCAAAGCTCTTATCATGGATGTAATGTTTGGTGGAACTGAGACAGTAGCATCCGTGATAGAATGGGCATTAGCAGAACTCATGAAAAGCCCAAAAGATCTTCAAAAGGTTCAACAAGAGCTCACCGATGTTATAGGTTTAGATCGAAGACTCAACGAAACCGATCTAGAAAAATTGACTTATCTCAAATGCATCATCAAAGAAACATTGCGACTCCACCCTCCAATTCCTTTACTCCTCCATGAGACAGCCGAAGATACTAATATCGCagGTTATTTTGTCCCAAAATCAACACGTGTTTGGATAAACGCATGGGCAATTGGACGTGACAAAAGCGCATGGGACGAACCAGAGAAATTTAACCCATCGCGATTCTTGAACAATGGTATGCCGGATTTCAAAGGAAGTAACTTCGAATTCATTCCATTTGGATCAGGAAGAAGATCATGTCCAGGAATGCAACTTGGACTATATGCTGTGGAAATGACTATAGCTAATTTGCTTCATTGTTTCAAGTGGGAGTTACCTAATGGAATGAAACCAAGTGAGCTTGATATGAATGATGTGTTTGGTCTCACTGCTCCTAGAGCTGTTCAGCTTGTTGCTGTACCTAGTTATCGTCTCAATTGTTctctttga 1548 0.4012 MEFVLQYVEPSNLIFLLISLTTFVLFSLVLQRKKLPYPPGPKGLPIIGNMLMMDQLTHRGLARLAEKFGGFCHLQMGAIHIVAISTPEMAREVLQTQDSVFSNRPANIAITYLTYDRADMAFANYGPFWRQMRKICVMKLFSRKRAESWASVREEVETMIQTVSSKAGLPVNLGELIFSLTRSITFKAAFGSNLNKGQEEFMGILQEFSKLFGAFDIAEFIPWLGWFNGQDFNKRLASARKALDVFIDEIIDDHVTKKNNMKNKDIENEEDVDMVDELMDFLDERDGAAAEISQSGLKLTRDNIKALIMDVMFGGTETVASVIEWALAELMKSPKDLQKVQQELTDVIGLDRRLNETDLEKLTYLKCIIKETLRLHPPIPLLLHETAEDTNIAGYFVPKSTRVWINAWAIGRDKSAWDEPEKFNPSRFLNNGMPDFKGSNFEFIPFGSGRRSCPGMQLGLYAVEMTIANLLHCFKWELPNGMKPSELDMNDVFGLTAPRAVQLVAVPSYRLNCSL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02493 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Tsu02g02493 515 Pfam Cytochrome P450 38 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 PANTHER CYTOCHROME P450 84A1-RELATED 1 515 - -
Tsu02g02493 515 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 1 515 - -
Tsu02g02493 515 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02493 515 SUPERFAMILY Cytochrome P450 38 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02493 Tsu-Chr2 25583122 25586982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02493 9 515 Monolignol Biosynthesis Gene Families AT4G36220 66.994 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02493 K09755 - zju:107426594 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02493 02 25583122 25586982 Tsu02g02493 02 25583122 25586982 ECH