Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02460 ATGACATCTTTAAATGTTGATTTGAAGCCAAAGGTTGGTATGTCATTTGAGAACTTAAATGGGGCTTATGAATTTTGGCGTGCATATAGTAAAGGAGTCGGCTTTGGAGTTAGAAAACggtatacaaacaaaaaaaagaaagacaacACTATATTATCGTGTAGGTTTGTTTGTTCTAAGGAAGGTCTACGAAGATCAGACCCGAGAGATCCTTTTGTTGGCAACCATAGAGCTCAGACTAGAACGGATTGCAAAGCAAGGATTTCACTTGGATATAAGAATGGAAAGTTTGTCATTCAGGAATTTGTGGAGGACCATAACCACCCTCTACAATGTCCAGAGACAACTCATATGCTTGCAGCACATAGAAAGATAACTGAAGTTCAGGCATGTGAGATTGATTTGGCTGAGGACTCAGGATTAAGGCAAAAATCAACATTTCAACTTATGAGCACACATGCAGGACATAGAGCTAATCTTGGATTTACAAAATTGGATGTAAACAATTACATCAGtgctaaaagaaaaaaagaatggtACACGGCGAGGTTGGATGTCTTTTGCAATATTTTCAGCGGCAATTGTTAG 588 0.3571 MTSLNVDLKPKVGMSFENLNGAYEFWRAYSKGVGFGVRKRYTNKKKKDNTILSCRFVCSKEGLRRSDPRDPFVGNHRAQTRTDCKARISLGYKNGKFVIQEFVEDHNHPLQCPETTHMLAAHRKITEVQACEIDLAEDSGLRQKSTFQLMSTHAGHRANLGFTKLDVNNYISAKRKKEWYTARLDVFCNIFSGNC 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02460 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 128 - -
Tsu02g02460 195 Pfam FAR1 DNA-binding domain 24 111 IPR004330 -
Tsu02g02460 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 6 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02460 Tsu-Chr2 25099145 25099732 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g02460 FAR1 2.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02460 - - cam:101507984 273.863