Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02455 ATGAGTCGTTTGATTTTGTTAATCGAAGAAACTGATAGTGAATCAAACAAAAGGGAATGGGTCGGACTAGTAGAGCTGAAGgtTAGATCCAACAATGACAATAGTTACAACACCAGTGTTGGTATGAAATTTGATAATGTAAATGAAGCATGGAAATTTTGGGCTGCGTATGGTAAAGAAAAAGGCTTTGGAGTTAGAAAACAATACTCCAACAAAAAGAAGGACGGCTCTATTAGATCGTGCAGATTCGTTTGTTGTAAAGAGGGTCATCGAACAAATAATCTAAAATCCCTTTTGGCGAAGAATCCTAAAGCTGAGACGAGAACTGATTGCGAAGCGAGAATTGCACTTAGTAAAAAGGATGAAAAGTTTGTAATCCACGAGTTTGTAGAAGCTCATAACCACCCTTTGCAGATTCCAGAAACAACACATATGTTAGCCTCAcatcataaaatatttgaagttcAAGCATATGAGATTGAAATGGCAGAAGACTCTGGATTGATGCAAAAGGCCTCATTTCAGCTCATGAGTGCACATGTTGGAGGTAGAGCTAATCTTGGATATACTCGGAGTCACATGTAG 585 0.3726 MSRLILLIEETDSESNKREWVGLVELKVRSNNDNSYNTSVGMKFDNVNEAWKFWAAYGKEKGFGVRKQYSNKKKDGSIRSCRFVCCKEGHRTNNLKSLLAKNPKAETRTDCEARIALSKKDEKFVIHEFVEAHNHPLQIPETTHMLASHHKIFEVQAYEIEMAEDSGLMQKASFQLMSAHVGGRANLGYTRSHM 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02455 194 Pfam FAR1 DNA-binding domain 52 138 IPR004330 -
Tsu02g02455 194 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 166 - -
Tsu02g02455 194 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 15 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02455 Tsu-Chr2 25050253 25052195 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g02455 FAR1 1.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02455 - - cam:101507947 213.386