Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02452 ATGGGAGAGGTAACGAGTGGAGGAGGTTGTTGTCAGCCGATGGATCTATTCCGTTCGGAGCCGATGCAACTCATTCAGCTGATCATTCCCATCGAATCCGCTCACCGCACTGTTTCTTATCTCGGTGACCTTGGCCTCCTTCAATTTAAAGATCTCAACTCGGAGAAGAGCCCTTTTCAACGGACTTATGCAGCTCAGattaaAAGATGCGGAGAGATGGCCCGTAAATTGCGTTTTTTCAAGGAACAAATGATTAAGGCAGGTGTTTCACCAAAAGGTTCCACAACAGAGTTTGACGCGAACATCGATAGCATTGAGATAAAACTTACAGAAATTGAGTCAGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGCACGTACAATGAACTTGTTGAGTACAAGCTTGTTCTGCAGAAGGCTGGTGACTTTTTCCACTCAGCTCAAAGCCGCGCCATAGAGCAGCAAAGAGAATATGAATCACGCAATCTGAGTGGGGAATCTATGGAAACACCTTTATTACAGGACCAAGAATTACCAGGTGATTCATCAAAGCCGGTTAAGTTGGGTTTTTTAGCAGGTCTTGTTCCCAGGGAAAAATCGGTGGCATTTGAGAGAATTTTATTTCGTGCAACTAGAGGCAATGTATTTTTGAGGCAGACTGCTGTTGAGAATCCGGTCACAGACCCTGTTTCTGGAGAAAAGActgagaaaaatgtttttgtcgTCTTCTATGCTGGTGAAAAAGTGAAAGCCAAGATTCTGAAAATCTGTGATGCCTTTGGTGCTAATCGATACCCGTTTGCTGAGGAACTTGGAAAACAAGCTCAAATGATTTCTGAGGTTTCTGGAAGACTTGCAGAATTGAAGACCACCATAGATGCTGGACTTTTGCACCGAGTTAACTTGCTGCAAAATATTGGGACTCAATACGAGCAATGGAATATTTTGGTGAGGAAGGAGAAATCCATTCACCATACCCTGAACATGCTAAGTCTTGATGTGACGAAAAAATGTCTTGTGGCTGAGGGGTGGAGTCCTGTTTTTGCAACAAAGCAGGTTCATGACGCGTTAAAGCGGGCTGCAAAGGACTCTAATTCTCAAGTCAGTGCCATTTTGCAAGTTTTGCATACCAGAGAGTCACCACCTACCTACTTCCGCACGAACAAATTTACTTCTCCGTATCAAGGAATTATAGACTCATATGGGGTTGCCAAGTATCAAGAGGCGAATCCTACTGTGTTTACTGTAGTTACCTTTCCATTTCTTTTCGCTGTGATGTTTGGTGATTGGGGGCATGGAATATGTTTACTGCTTGCAGCTCTATATTTCATAGTCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACGGAGATGACTTTTGGTGGTCGTTATATTATTTTCATGATGGCACTCTTCTCAATCTACACTGGCTTTATCTATAATGAGTTCTTTTCTGTCCCGTTTGAACTCTTCGCCCCCTCTGCATATGAGTGTCGTGACATTTCTTGCAGGGATTCTACAACAATAGGACTGATAAAAACGGGTCCTACTTACCCCTTTGGATTGGATCCTGTATGGCATGGTACACGTAGTGAATTACCATTCCTGAACtcattgaaaatgaaaatgtcaATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTATAATGAGCTATTGCAATGCCAGGTTCTTCAAGAACAGCGTAAATGTATGGTTCCAATTTATCCCCCAGATGATATTTCTTAACAGTCTATTCGGCTACCTATCCCTTCTTATTATTGTGAAGTGGTGCACGGGTTCTCAAGCTGATTTGTACCACGTAATGATCTACATGTTCCTGAGCCCAACAGATGATTTGGGTGAGAACCAACTCTTTGCGGGTCAGAAAAATCTTCAGCTCGTGCTTTTGCTTCTGGCCGGTGTTGCTGTGCCCTGGATGCTGTTGCCAAAACCGTTTATTTTGAAGAAGCAACATGAAGCTAGGCACGGGGATGAATCATATGCACCACTTCCAAACACGGAGGAGAGCTTGCAAGTGGAGTCAAATCATGATTCCCATGGTCATGAGGAGTTTGAGTTCAGTGAAATTTTTGTACATCAACTCATCCACACCATAGAATTTGTACTTGGAGCAGTATCTAATACAGCTTCTTACCTTCGTCTTTGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGATGATGGCATGGGGGTACAATAATGTGATTATCCTGATAGTTGGTttaattgttttcatttttgctACCGTTGGAGTGTTACTTGTCATGGAAACTCTGAGTGCCTTCTTGCATGCATTGCGTCTTCACTGGGTGGAGTACCAAAACAAGTTTTACGAGGGTGATGGTTACTTGTTCCGTCCTTTCTCATTCTCATTGCTAGACGAAGAGGATGACGTGCTTTAA 2469 0.4208 MGEVTSGGGCCQPMDLFRSEPMQLIQLIIPIESAHRTVSYLGDLGLLQFKDLNSEKSPFQRTYAAQIKRCGEMARKLRFFKEQMIKAGVSPKGSTTEFDANIDSIEIKLTEIESELTEMNANGEKLQRTYNELVEYKLVLQKAGDFFHSAQSRAIEQQREYESRNLSGESMETPLLQDQELPGDSSKPVKLGFLAGLVPREKSVAFERILFRATRGNVFLRQTAVENPVTDPVSGEKTEKNVFVVFYAGEKVKAKILKICDAFGANRYPFAEELGKQAQMISEVSGRLAELKTTIDAGLLHRVNLLQNIGTQYEQWNILVRKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFATKQVHDALKRAAKDSNSQVSAILQVLHTRESPPTYFRTNKFTSPYQGIIDSYGVAKYQEANPTVFTVVTFPFLFAVMFGDWGHGICLLLAALYFIVREKKLSSQKLDDITEMTFGGRYIIFMMALFSIYTGFIYNEFFSVPFELFAPSAYECRDISCRDSTTIGLIKTGPTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNARFFKNSVNVWFQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFAGQKNLQLVLLLLAGVAVPWMLLPKPFILKKQHEARHGDESYAPLPNTEESLQVESNHDSHGHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLMMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEYQNKFYEGDGYLFRPFSFSLLDEEDDVL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02452 822 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 6 820 - -
Tsu02g02452 822 PIRSF ATP6V0A1 12 821 IPR026028 GO:0000220|GO:0046961
Tsu02g02452 822 Pfam V-type ATPase 116kDa subunit family 40 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
Tsu02g02452 822 Coils Coil 102 129 - -
Tsu02g02452 822 PANTHER VACUOLAR PROTON ATPASES 6 820 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02452 Tsu-Chr2 25032922 25042647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02452 14 820 Primary Pumps ATPases(2) AT4G39080 77.750 0.0 1298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02452 K02154 - gmx:100810062 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02452 02 25032922 25042647 Tsu02g02452 02 25032922 25042647 ECH