Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02449 ATGGTCCAATATAATAAGGTTTGCAGTGAACTTGGTATTTTAGCTGATCATGTTGAATCCGAAAAGGGCAGAGGAACAGAtggaatgaagaaaatgaaaagatcGAATTCAATTAAGCTTTCGGATTTGGAGGCTATACAATCATCACTTCCAAGGAGGAGCTTATCTCAATCAAGAAAGTTGTTACCGCTTCATGTTCCAACCACTGCAGCAGCCCCACAAAAGCATAAGCCTTTGATGAGAAAGTCAGTCAATTACATGAAGCCCACCAGTAGTTCAGATGCAAAAAAGGTGCTTTTGCCGGTGACTCTTCAGAATAACCAATGCGGTTCAGATGGTAAGAATCTGCCACAAAAATATTCGAGTAGTTCAAAATCTAGTTTTGTTTCTAACAAAAACACTGCCAAAACCATGTCAAGATCATCTAGTATGAACTTGGTGAGAACATCAACACAGACTCTTagttttaaaccaagtacaacTTGTCAGAGAAAATCTACCGCAGCAACACTGCCTGCAGATATTAATGCAACATACAGAGCTACCTGCTCTTCAACTTTGAAAGATTCCAAGTTCCCTGCACACCTCATGCTTAACACTGGAGGTAGTGACTCAGAGGGAGCTTCGGTCATTAAGGTTTGTCCATATACATATTGTTCTCTCAATGGAAACCGCCATGCTCCCGGAAAGAGGCGTTTTCTGGAGACTCGAAAAAGTATAAAGCTGGAAGCTCCTGAAAGATTGAAGGTGCCTTGTGAGAAGAGGAAGAACTTTGATATTGAGCAGACTGTCTATTATGGAAAACATGCATGCGATGAAGCTGATAAGGGTAAGCCAATAATCATTCCCTTAATACAAGAAATTggtatagatttttttaatgaattatatGGCGAGGAAAGGGAAAAAGCATACAAAGTGGAAAAACCTGACACTGTCAAGCACCTTGAGGATCAAGAAGGTACCAAGTTTGCAAAGGCGGTGAATGACAACATAGCAGACAAGGAAGATGTTGGTCAAGTAACTCCGTGTTTGTCTTGTGATGATCTTACCAAGTCTGAGATCAATCCCAAGGTGGAATTCAAAATTGAAGCAAATACCAAGGAAAGCTTTCACCATGAACTAAACTCTGAAGATGCAGACAAAAACCACCCACCTAGCTGTTTTCATGAAGAAATATGCACCGGAAGCTACTGCCATGAGGTTAGTGATGACGATGAACATGTGGAGAATATTGAATTGGATGATTCTGATACCCAAAGTGCTGATATGGAGTGGGAGGAGAAACAATTTTGTCCAATCAACTATAAAGAGGATATTGGCTCTTCTGTCATCACACATGAGACTGACTCAAAATTTAAGTCCTTATCAGAGGGTTCACATGATATATTTGAAATGTGGCTAGGTGACATCTCTAGCAACCATTATGCAAACATTATGGTTGAAAAAGAATTGCAAGACAAAGAGgagaaaatcacaattttttatgcACAGCATCATGATACAAACTGTGTACAGGGAAGCACAGGTGAAAGCATACAGACTGACTATCTGTCTAAGGGCATAGATCACGAGTATGGCCAATCTTATTTGGTGCAGTATCTGAGAAACACAGAAGGCAATGATAGAGAAATTGAAAAGCACGTGGATAATGAGGTCATTTGTGCCTCGGTGGTACTTGATGAAGATACAATTGACACTAGTGAAGTTCACAATATCTGTGAAACTCGCAAGATTGAAGAGAGTCGTGAAGACAGCAACACAGACCTAGAGAATAATGACAAAGAAATTTGTCAAAGAAACCAAATTCCCTTATCTAATGTGCCTGAAGAGAGCAACATTATTGTTCAGGACCAAGAATTTCTGGAAGAAGCTCAAGTTACATCTACTGAGTTCCAGATCATAACCTGTATAGGTGGTGAAGGGCGGAGTATGAGCAATAATAGGCAAAGGCCAGCTAAGAACAAAAGACCTATGAAAGATGCTGAGCAAATGAGAACGATCAACCCAAGAAAGCCAAATTTCCTCCCCTTTGTTCCTGACCCAGAACCAGAGAAGGTTGAATTGAAGCATCAAATGATGGATAATAGAAAAAATGCAGAGGAATGGATGCTTGATTTTTCACTCAGACAAGCTGTCACAAAACTTGCTCCAGCCAGGAAAAAGAAGGTTGCATTGCTTGTTGAAGCTTTTGAAACAATAATGTCAACACCAGAATGTGAAACTCATACGAGAAACAATTCACCCTTCACGCATGCAAGACCTATTCAAGCTTGTAGCTAA 2283 0.3894 MVQYNKVCSELGILADHVESEKGRGTDGMKKMKRSNSIKLSDLEAIQSSLPRRSLSQSRKLLPLHVPTTAAAPQKHKPLMRKSVNYMKPTSSSDAKKVLLPVTLQNNQCGSDGKNLPQKYSSSSKSSFVSNKNTAKTMSRSSSMNLVRTSTQTLSFKPSTTCQRKSTAATLPADINATYRATCSSTLKDSKFPAHLMLNTGGSDSEGASVIKVCPYTYCSLNGNRHAPGKRRFLETRKSIKLEAPERLKVPCEKRKNFDIEQTVYYGKHACDEADKGKPIIIPLIQEIGIDFFNELYGEEREKAYKVEKPDTVKHLEDQEGTKFAKAVNDNIADKEDVGQVTPCLSCDDLTKSEINPKVEFKIEANTKESFHHELNSEDADKNHPPSCFHEEICTGSYCHEVSDDDEHVENIELDDSDTQSADMEWEEKQFCPINYKEDIGSSVITHETDSKFKSLSEGSHDIFEMWLGDISSNHYANIMVEKELQDKEEKITIFYAQHHDTNCVQGSTGESIQTDYLSKGIDHEYGQSYLVQYLRNTEGNDREIEKHVDNEVICASVVLDEDTIDTSEVHNICETRKIEESREDSNTDLENNDKEICQRNQIPLSNVPEESNIIVQDQEFLEEAQVTSTEFQIITCIGGEGRSMSNNRQRPAKNKRPMKDAEQMRTINPRKPNFLPFVPDPEPEKVELKHQMMDNRKNAEEWMLDFSLRQAVTKLAPARKKKVALLVEAFETIMSTPECETHTRNNSPFTHARPIQACS 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02449 760 MobiDBLite consensus disorder prediction 741 760 - -
Tsu02g02449 760 MobiDBLite consensus disorder prediction 109 149 - -
Tsu02g02449 760 Pfam Plant calmodulin-binding domain 654 736 IPR012417 GO:0005516
Tsu02g02449 760 SMART CaM_binding_2 623 736 IPR012417 GO:0005516
Tsu02g02449 760 MobiDBLite consensus disorder prediction 643 663 - -
Tsu02g02449 760 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 760 - -
Tsu02g02449 760 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 760 IPR044681 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02449 Tsu-Chr2 25020856 25023697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02449 654 760 Calmodulin-binding Proteins AT2G38800 50.926 3.91e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02449 - - mtr:MTR_4g071030 902.508