Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02443 ATGGCTTCATCAAGTGGAACATCTTCAGGTTCATCTTTGCTACAAAACTCAGGTTCTGAAGAAGATTTACAGTTGTTGATGGATCAGAGAAAGAGGAAGAGGATGATATCGAACCGCGAATCAGCTCGTCGGTCACGGATGAGGAAACAAAAGCACTTGGATGATCTTGTTTCTCAAGTTGCTAAATTGAGAAAAGAGAATCAAGAAATGCTTACAAGTGTTAATATCACCACTCAACAGTGTTTGAGTGTTGAAGCTGAAAATTCAGTTTTGAAGGCTCAGATGAATGAATTGAGTAATAGGTTGGAATCTTTGAATGAAATTGTTGGTGTCTTGAATTCAAGCAATGGAGTTTTTGGAGCTTCAAATAATGGTTTCTTCTTCAACTCTTTGAATAATATGTCTTACATGAATCAAAATATCATGGCTTCTGCAGACATTTTGCAGTACTGA 453 0.3687 MASSSGTSSGSSLLQNSGSEEDLQLLMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAKLRKENQEMLTSVNITTQQCLSVEAENSVLKAQMNELSNRLESLNEIVGVLNSSNGVFGASNNGFFFNSLNNMSYMNQNIMASADILQY 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02443 150 Gene3D - 28 83 - -
Tsu02g02443 150 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Tsu02g02443 150 MobiDBLite consensus disorder prediction 1 23 - -
Tsu02g02443 150 PANTHER BZIP TRANSCRIPTION FACTOR 1 148 - -
Tsu02g02443 150 MobiDBLite consensus disorder prediction 1 51 - -
Tsu02g02443 150 Pfam bZIP transcription factor 30 81 IPR004827 GO:0003700|GO:0006355
Tsu02g02443 150 MobiDBLite consensus disorder prediction 24 51 - -
Tsu02g02443 150 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Tsu02g02443 150 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Tsu02g02443 150 Coils Coil 46 73 - -
Tsu02g02443 150 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 148 - -
Tsu02g02443 150 Coils Coil 81 108 - -
Tsu02g02443 150 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Tsu02g02443 150 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02443 Tsu-Chr2 24935726 24937108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02443 26 150 bZIP Transcription Factor Family AT4G34590 58.696 3.37e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g02443 bZIP_1 1.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02443 K25786 - gmx:100101862 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02443 02 24935726 24937108 Tsu02g02443 02 24935726 24937108 ECH