Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02391 ATGTCAGAGTCCACAGCCACATCAACTTCTCTCATGAGTTTGAAAGTTCTCGTTTTAGCAGCAATTTTCCTCATCATCGTTATAATAATCGTGCTTTTGATCTTCCTCTGTTTTCGAAGTAACCGAAGCAACAAGAAACGGAAGCTGTTACCGAAGCTACATAGCTCCGGCACCACTCCTCTGGTTTCTAAGGAAATCGCGGTGATTTCTAAAGAAATTGATCTCACGCGCTCCACTGAACAAACGCGGATTCAGAttcttgatgatgttgttgGCGAGAAGAAGGAGGCGGAGATTAAGGTTGAAATTAGGAAAGGTGACGTGTTAGGTGGTGGGGTCCACATGGAGGAGGATCCAAATATAGGGTGGGGTCGGTGGTATAGTTTGAAGGAAGTGGAAATGGCGACACGTGGATTTGCGGAAGGGAATGTGATTGGTGAAGGAGGGTATGGTGTTGTGTATAGAGGTGTTTTGCAAGATTCTGTTGTGGCGGTGAAGAATCTTCACAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGCAAAGTAAGGCATAAGAATTTAGTTCGTTTAGTAGGATATTGTGCAGAAGGTGCTCGAAGGATGCTTGTTTATGAATATGTTGAAAATGGAAACTTGGAGCAATGGCTACATGGTAATGTAGGACCAGTCAGCCCCTTGATGTGGGATATTCGAATGAAGATTGCCATTGGAACTGCGAAAGGGCTAACCTATTTGCATGAAGGCTTAGAACCGAAAGTTGTGCACCGAGATATAAAATCTAGCAACATCCTTTTGGACAAAAACTGGAATGCCAAAGTTTCTGATTTTGGACTTGCCAAGCTCTTAGGATCTGAGAAAACTCACGTAACCACGCGTGTAATGGGAACATTTGGGTATGTTTCGCCTGAGTACGCAAGCACAGGTATGCTTAATGAGCGTAGCGATGTTTATAGTTTTGGAGTTCTACTCATGGAAATAATCACAGGAAGAACCCCTATTGATTATTCAAAACCACCTGGAGAGATGAATTTGGTTGATTGGTTTAAGGGAAAGGTAGCAAGTCGCCGCAGTGACGATCTAGTTGATCCTTTGATTGAGATTCCACCTTGTCCAAGATCTCTGAAGCGAGTTTTACTTGTTTGCCTACGCTGTATAGACTTGGATGTCATCAAGCGACCGAAGATGGGTCAAATTGTTCATATGCTTGAGTCAGATGATTTCCCCTTTCGTTCTGAGCTACGTACAATTAGGGACAAAGATTCTGTGCCTTCTCAAGCAGACGTTTCCATCAAAGTTCCATGTCAAAGAAAGCTTGCAGAACCTGCGGAAAAATCAACACATAGATGA 1368 0.4291 MSESTATSTSLMSLKVLVLAAIFLIIVIIIVLLIFLCFRSNRSNKKRKLLPKLHSSGTTPLVSKEIAVISKEIDLTRSTEQTRIQILDDVVGEKKEAEIKVEIRKGDVLGGGVHMEEDPNIGWGRWYSLKEVEMATRGFAEGNVIGEGGYGVVYRGVLQDSVVAVKNLHNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVENGNLEQWLHGNVGPVSPLMWDIRMKIAIGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRTPIDYSKPPGEMNLVDWFKGKVASRRSDDLVDPLIEIPPCPRSLKRVLLVCLRCIDLDVIKRPKMGQIVHMLESDDFPFRSELRTIRDKDSVPSQADVSIKVPCQRKLAEPAEKSTHR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02391 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Tsu02g02391 455 ProSitePatterns Protein kinases ATP-binding region signature. 145 166 IPR017441 GO:0005524
Tsu02g02391 455 CDD STKc_IRAK 145 410 - -
Tsu02g02391 455 PANTHER RECEPTOR-LIKE KINASE 5 455 - -
Tsu02g02391 455 SUPERFAMILY Protein kinase-like (PK-like) 122 410 IPR011009 -
Tsu02g02391 455 Pfam Protein tyrosine and serine/threonine kinase 142 409 IPR001245 GO:0004672|GO:0006468
Tsu02g02391 455 Gene3D Phosphorylase Kinase; domain 1 113 213 - -
Tsu02g02391 455 Gene3D Transferase(Phosphotransferase) domain 1 214 422 - -
Tsu02g02391 455 PANTHER OS01G0323000 PROTEIN 5 455 - -
Tsu02g02391 455 ProSiteProfiles Protein kinase domain profile. 139 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02391 455 SMART serkin_6 139 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02391 Tsu-Chr2 24418136 24421962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02391 82 410 Receptor kinase-like Gene Family AT4G02010 44.311 2.31e-90 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tsu02g02391 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02391 - - gmx:100305442 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02391 02 24418136 24421962 Tsu02g02391 02 24418136 24421962 ECH