Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02338 ATGGCTACAACCACACTAAACTTGTTTTCTCACATCCTctcacttttaaaaaatattcaactcAATGAGATTGTTATTGCATCCATGGTTTTCATAATCATTCATTCCTTGAGATCCAAGAAACGACATGGCCTAATCAATTGGCCTATCTTTGGAATGCTACCTGCATTACTCATTGGACTCAAAACCAGCAACATGTATGAAAGACTAACTGATATACTTATACAACAAAATGGAACCTTTAGATTCAAAGGACCATGGTTCACTAGTCTCAACCTTGTAGTAACCTCGGAACCGCAAAATGTAGAACATCTTCTCAAAACAAAGTTCACTAATTTCCCTAAAGGAAACTATTTCAAAGACACAGTTTCTGATTTACTTGGAGACGGTATTTTTGCTACAGATAATGAAACATGgcagaaacaaagaaaaacagcGAGTATCGAGTTTCATTCAACAAAGTTTAGGAAGTTAACAATCGAGTCATTGTTTGAGCTTGTGAACAATAGGCTCATACCTGTCTTAGATTCATCTTTGAAGAAATCAGTTTCGATTGATCTTCAAGATATTTTGTTGAGATTAACTTTTGATAATGTTTGTATGATTGCTTTTGGTGTTGATCCTGGCTGTTTACAACCGCATTTACCTGTAATACCCTTTGCAGAAGCTTTTGAGGATGCAACAGAAGCTATTTTGCTTCGATTTCCGTCGCTGGCTTGTGTGTGGAAGACTATGAGGTTTCTTAACTTAGGTATGGAAAGAAAGTTAAAGAAATCAATACAAAAAGTTGATGAATTTGCAGAGAATGTTATAagggaaagaaagaaagaactaTCTTTGGAAAATGAAcatgatgacgatgatgataCGCGAAAATCAGATTTGTTAACTGTGTTTATGAGGCTTAAAGATGAGAATGGAATGGCTTATTCAGATAAGTTCTTGAGGGATATATGCGTGAATTTTATATTAGCTGGGAGGGATACTTCTTCTGTTGCTTTAAGCTGGTTTTTCTGGTTGATAGATCAGAATCATGAAGTGGAGGAGAGAATGTTAGAAGAGATTTGCAGAGTTGTGAGTGAGAGAGAGGAGATTAAGAAGGAAGAATTTGATAATAATTGTTTGAGATTCATGCCTGAGGAGATTAAGAAAATGGATTATTTGCATGCTGCTCTTTCAGAAGCTCTTAGATTGTATCCTTCTGTGCCTATGGACCATAAGGAGGTGGTAGAAGATGATACATTCCCAGATGGAACAAAGCTAAAGAAAGGAACAAAAGTGATATATGCAATATATTCAATGGGAAGAATGGAAAGCATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAAAGATGGTTAACTAAAGAAGGTAATTTCATGAGTGAATCTGCCTACAAATTCACTGCTTTTAATGGAGGACCAAGATTATGTTTAGGCAAAGATTTTGCATACTATCAAATGAAATATGTTGCAGCTAGCATTATATTTCATTATCATGTTAAGGTTGTTGAGAATCACCTTATTGTTCCTAAGCTTTCTTTGACACTTTACATGAAGCATGGATTGAAAGTTAATCTTCATAGGCGTTGTGATGAAGAGATTGGTAAATATTTGAAGTTTAGTTAG 1629 0.3364 MATTTLNLFSHILSLLKNIQLNEIVIASMVFIIIHSLRSKKRHGLINWPIFGMLPALLIGLKTSNMYERLTDILIQQNGTFRFKGPWFTSLNLVVTSEPQNVEHLLKTKFTNFPKGNYFKDTVSDLLGDGIFATDNETWQKQRKTASIEFHSTKFRKLTIESLFELVNNRLIPVLDSSLKKSVSIDLQDILLRLTFDNVCMIAFGVDPGCLQPHLPVIPFAEAFEDATEAILLRFPSLACVWKTMRFLNLGMERKLKKSIQKVDEFAENVIRERKKELSLENEHDDDDDTRKSDLLTVFMRLKDENGMAYSDKFLRDICVNFILAGRDTSSVALSWFFWLIDQNHEVEERMLEEICRVVSEREEIKKEEFDNNCLRFMPEEIKKMDYLHAALSEALRLYPSVPMDHKEVVEDDTFPDGTKLKKGTKVIYAIYSMGRMESIWGKDCLEFKPERWLTKEGNFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIFHYHVKVVENHLIVPKLSLTLYMKHGLKVNLHRRCDEEIGKYLKFS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02338 542 SUPERFAMILY Cytochrome P450 46 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 PANTHER CYTOCHROME P450 86B1-LIKE 12 532 - -
Tsu02g02338 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Tsu02g02338 542 PANTHER CYTOCHROME P450 12 532 - -
Tsu02g02338 542 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 PRINTS E-class P450 group I signature 40 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 Pfam Cytochrome P450 63 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 Gene3D Cytochrome P450 40 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02338 542 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02338 Tsu-Chr2 23744474 23746741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02338 8 538 Cytochrome P450 AT5G23190 67.420 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02338 K15402 - gmx:100809503 808.52